Genomic Introgression Between Critically Endangered and Stable Species of Darwin's Tree Finches on the Galapagos Islands by Rachael Y. Dudaniec, Sonu Yadav, Julian Catchen, Sonia Kleindorfer

“…With single nucleotide polymorphism (SNP) data from the same Floreana tree finches sampled in 2005 and 2013 (n = 95), we examine genome‐wide divergence across parental and hybrid birds and evidence for selection in hybrids. …”
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Retraction Note: Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root-knot nematode by Georgios D. Koutsovoulos, Marine Poullet, Abdelnaser Elashry, Djampa K. L. Kozlowski, Erika Sallet, Martine Da Rocha, Laetitia Perfus-Barbeoch, Cristina Martin-Jimenez, Juerg Ernst Frey, Christian H. Ahrens, Sebastian Kiewnick, Etienne G. J. Danchin

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Practical Calling Approach for Exome Array-Based Genome-Wide Association Studies in Korean Population by Tae-Joon Park, Lyong Heo, Sanghoon Moon, Young Jin Kim, Ji Hee Oh, Sohee Han, Bong-Jo Kim

“…International Journal of Genomics…”
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Genome-resolved year-round dynamics reveal a broad range of giant virus microdiversity by Yue Fang, Lingjie Meng, Jun Xia, Yasuhiro Gotoh, Tetsuya Hayashi, Keizo Nagasaki, Hisashi Endo, Yusuke Okazaki, Hiroyuki Ogata

“…A newly developed computational pipeline generated 1,065 high-quality genomes covering six major giant virus lineages. These genomic data revealed year-round recovery of the viral community structure at the study site and distinct dynamics of viral populations that were classified as persistent (n = 9), seasonal (n = 389), sporadic (n = 318), or others. …”
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Genome-wide profiling of tRNA modifications by Induro-tRNAseq reveals coordinated changes by Yuko Nakano, Howard Gamper, Henri McGuigan, Sunita Maharjan, Jiatong Li, Zhiyi Sun, Erbay Yigit, Sebastian Grünberg, Keerthana Krishnan, Nan-Sheng Li, Joseph A. Piccirilli, Ralph Kleiner, Nicole Nichols, Brian D. Gregory, Ya-Ming Hou

“…Here we use Induro—a new group-II intron-encoded RT—to map and quantify genome-wide tRNA modifications in Induro-tRNAseq. …”
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Efficient genome editing in dicot plants using calreticulin promoter-driven CRISPR/Cas system by Bingjie Li, Yun Shang, Lixianqiu Wang, Jing Lv, Qi Wu, Fengjiao Wang, Jiangtao Chao, Jingjing Mao, Anming Ding, Xinru Wu, Kaili Xue, Chen Chen, Mengmeng Cui, Yuhe Sun, Huawei Zhang, Changbo Dai

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Importance of appropriate genome information for the design of mating type primers in black and yellow morel populations by Melissa Cravero, Aaron J. Robinson, Patrick Hilpisch, Patrick S. Chain, Saskia Bindschedler, Pilar Junier

“…This indicates an inherent fault in the original primer design which utilized a single Morchella genome, as the use of two genomes with complementary mating types would be required to design accurate primers for both idiomorphs. …”
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Genomic selection for resistance to one pathogenic strain of Vibrio splendidus in blue mussel Mytilus edulis by Munusamy Ajithkumar, Jonathan D’Ambrosio, Marie-Agnès Travers, Romain Morvezen, Lionel Degremont

“…Additionally, we performed a genome-wide association study (GWAS) to identify putative QTLs underlying disease resistance. …”
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Comparative analysis of chloroplast genomes reveals molecular evolution and phylogenetic relationships within the Papilionoideae of Fabaceae by Qian Qin, Yanjing Dong, Jialong Chen, Bo Wang, Yuxin Peng, XinPeng Zhang, Xiaoyun Wang, Jinxiang Zeng, Guoyue Zhong, Shouwen Zhang, Xiaolang Du

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COVFlow: phylodynamics analyses of viruses from selected SARS-CoV-2 genome sequences by Danesh, Gonché, Boennec, Corentin, Verdurme, Laura, Roussel, Mathilde, Trombert-Paolantoni, Sabine, Visseaux, Benoit, Haim-Boukobza, Stéphanie, Alizon, Samuel

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Genomic landscape and comparative analysis of tissue and liquid-based NGS in Taiwanese anaplastic thyroid carcinoma by Chun-Nan Yeh, Shu-Fu Lin, Chia-Ling Wu, Miaw-Jene Liou, I-Wen Chen, Chiao-Ping Chen, Ching-Fu Chang, Qi‑An Wang, Chiao-En Wu

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Biological Characteristics and Whole-Genome Analysis of a Porcine <i>E. coli</i> Phage by Shenghui Wan, Nana Li, Sajid Habib, Pei Zheng, Yanfang Li, Yan Liang, Yonggang Qu

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Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis by Fernando Martínez-Ocampo, Rosa Estela Quiroz-Castañeda, Itzel Amaro-Estrada, Edgar Dantán-González, Jesús Francisco Preciado de la Torre, Sergio Rodríguez-Camarillo

“…International Journal of Genomics…”
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Detailed genetic analyses highlight genetic variation and genomic regions for lead tolerance in spring wheat by Amira M. I. Mourad, Amira M. I. Mourad, Ahmed Sallam, Ahmed Sallam, Khaled A. Farghaly, Andreas Börner

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Engineered CRISPR-Cas9 for Streptomyces sp. genome editing to improve specialized metabolite production by Duck Gyun Kim, Boncheol Gu, Yujin Cha, Jeonghan Ha, Yongjae Lee, Gahyeon Kim, Byung-Kwan Cho, Min-Kyu Oh

“…Abstract The CRISPR-Cas9 system has frequently been used for genome editing in Streptomyces; however, cytotoxicity, caused by off-target cleavage, limits its application. …”
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Genome-wide identification, characterization, and expression analysis of BZR transcription factor family in Gerbera hybrida by Qishan Luo, Gan Huang, Xiaohui Lin, Xiaojing Wang, Yaqin Wang

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Genome-Wide DNA Methylation in Mixed Ancestry Individuals with Diabetes and Prediabetes from South Africa by Tandi E. Matsha, Carmen Pheiffer, Stephen E. Humphries, Junaid Gamieldien, Rajiv T. Erasmus, Andre P. Kengne

“…Aims. To conduct a genome-wide DNA methylation in individuals with type 2 diabetes, individuals with prediabetes, and control mixed ancestry individuals from South Africa. …”
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Effectiveness of ISSR markers for detecting genomic variability in <I>Panicum miliaceum</I> L. accessions by D. Kh. Arkhestova, A. A. Yakhutlova, A. D. Khaudov, L. Kh. Sokurova, T. V. Kulemina

“…It was shown that four ISSR markers with the best informativeness values provided sufficient polymorphism to assess the genetic diversity of the analyzed P. miliaceum genotypes and could be recommended for identification of the variability in the genome of millet accessions.…”
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Comparative Genomic In Situ Hybridization and the Possible Role of Retroelements in the Karyotypic Evolution of Three Akodontini Species by Naiara Pereira Araújo, Gustavo Campos Silva Kuhn, Flávia Nunes Vieira, Thaís Queiroz Morcatty, Adriano Pereira Paglia, Marta Svartman

“…International Journal of Genomics…”
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Genomic Insights Into Red Squirrels in Scotland Reveal Loss of Heterozygosity Associated With Extreme Founder Effects by Melissa M. Marr, Emily Humble, Peter W. W. Lurz, Liam A. Wilson, Elspeth Milne, Katie M. Beckmann, Jeffrey Schoenebeck, Uva‐Yu‐Yan Fung, Andrew C. Kitchener, Kenny Kortland, Colin Edwards, Rob Ogden

Subjects: “…conservation genomics…”
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