Decomposition of the pangenome matrix reveals a structure in gene distribution in the Escherichia coli species by Siddharth M. Chauhan, Omid Ardalani, Jason C. Hyun, Jonathan M. Monk, Patrick V. Phaneuf, Bernhard O. Palsson

“…The rare genome (consisting of genes found in <6.8% of all strains) consisted of 163,619 genes, about 79% of which represented variations of 315 underlying transposon elements. …”
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USE OF SYNTHETIC FORMS IN THE PRESERVATION AND EXPLOITATION OF THE GENE POOL OF WILD COMMON WHEAT RELATIVES by R. O. Davoyan, I. V. Bebyakina, O. R. Davoyan, A. N. Zinchenko, E. R. Davoyan, A. M. Kravchenko, Y. S. Zubanova

“…The synthetic forms provide a unique genetic basis for preservation and use of the gene pool of wild relatives in wheat breeding. These forms have been used to produce secondary recombination synthetic forms (RS forms) with genome constitutions BBAADS, BBAASR and BBAASSsh. …”
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Microplastics mediates the spread of antimicrobial resistance plasmids via modulating conjugal gene expression by Qiu E. Yang, Zhenyan Lin, Dehao Gan, Minchun Li, Xuedan Liu, Shungui Zhou, Timothy R. Walsh

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VARIABILITY OF A FRAGMENT OF THE ACID VACUOLAR INVERTASE PAIN-1 GENE IN POTATO CULTIVARS by M. A. Slugina, E. Z. Kochieva

“…For the first time Pain-1 gene fragment (exon V – exon VII) polymorphism was determined in 19 potato varieties. …”
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Machine learning-driven identification of critical gene programs and key transcription factors in migraine by Lei Zhang, Yujie Li, Yunhao Xu, Wei Wang, Guangyu Guo

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Whole Exome Sequencing Uncovers Germline Variants of Cancer-Related Genes in Sporadic Pheochromocytoma by Milena Urbini, Margherita Nannini, Annalisa Astolfi, Valentina Indio, Valentina Vicennati, Matilde De Luca, Giuseppe Tarantino, Federica Corso, Maristella Saponara, Lidia Gatto, Donatella Santini, Guido Di Dalmazi, Uberto Pagotto, Renato Pasquali, Andrea Pession, Guido Biasco, Maria A. Pantaleo

“…About 50% of PCCs examined had somatic mutations on the known susceptibility VHL, NF1, and RET genes. In addition to these driver events, mutations on SYNE1, ABCC10, and RAD54B genes were also detected. …”
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Expression of Otx Genes in Müller Cells Using an In Vitro Experimental Model of Retinal Hypoxia by Claudio Azzolini, Simone Donati, Giovanni Micheloni, Vittoria Moretti, Roberto Valli, Francesco Acquati, Lucy Costantino, Fulvio Ferrara, Davide Borroni, Elias Premi, Francesco Testa, Francesca Simonelli, Giovanni Porta

“…The VEGF-A gene was strongly upregulated at both the CoCl2 and recovery time points. …”
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Characterization of Mating Type Genes in Aspergillus flavus Populations from Two Locations in Kenya by Ouko Abigael, Okoth Sheila, Amugune Nelson, Vesa Joutsjoki

“…There were no MAT1-1 genes sampled in Nandi, and in Makueni their proportion was 15.91%. …”
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Aberrant methylation of placental development genes in chorionic villi of spontaneous abortions with trisomy 16 by О. Yu. Vasilyeva, E. N. Tolmacheva, A. E. Dmitriev, Ya. A. Darkova, E. A. Sazhenova, T. V. Nikitina, I. N. Lebedev, S. A. Vasilyev

“…In the group of spontaneous abortions, there was no increase in the level of methylation of the PRDM1 and PSG2 genes, but the level of methylation of the ADORA2B gene was significantly increased compared to the induced abortions (p = 0.032). …”
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Comparative analysis of mitochondrial genomes from Buthidae (Scorpiones): gene rearrangement and phylogenetic implications by Wei Xu, Gaoji Zhang, Tangjun Xu, Ke He, Jiachen Wang, Zeyang Liu, Hongyi Liu

“…The Ka/Ks ratios within 13 protein-coding genes (PCGs) were lower than 1, suggesting that they had been subject to purifying selection in Buthidae. …”
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Cloning and expression characterisation of LiDXS2 gene in Oriental Lily (Lilium 'Sorbonne') by Yu Jiaxuan, Wu Nana, Fu Ruyu, Xue Lili, Zhang Jinzhu, Dong Jie, Yang Tao, Fan Jinping

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COMBINATIONS OF ALLELES OF THE Ppd AND Vrn GENES DETERMINE THE HEADING TIME IN COMMON WHEAT VARIETIES by E. K. Potokina, V. A. Koshkin, E. A. Alekseeva, I. I. Matvienko, V. A. Filobok, L. A. Bespalova

“…Allele combinations of the Ppd-D1, Vrn-A1, Vrn-B1 and Vrn-D1 genes have been investigated with allele-specific primers in 56 wheat cultivars and breeding lines raised at the Lukyanenko Krasnodar Research Institute of Agriculture. …”
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Inhibition of transcriptional regulation of detoxification genes contributes to insecticide resistance management in Spodoptera exigua by Bo Hu, Yuping Deng, Tao Lu, Miaomiao Ren, Kuitun Liu, Cong Rao, Hailiang Guo, Jianya Su

“…Here, we confirm that CncC/Maf are the key regulators of various detoxification genes involved in insecticide resistance in Spodoptera exigua. …”
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Ploidy levels influence cold tolerance of Cyclocarya paliurus: insight into the roles of WRKY genes by Zanpei Zhang, Qianxing Mao, Yueying Gu, Xulan Shang, Yanmeng Huang, Shengzuo Fang

“…A total of 88 CpaWRKY genes were identified from the C. paliurus genome, and RNA-Seq results showed significant differences in WRKY gene expression in C. paliurus under cold stress. …”
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Analysis of Gene Expression in Human Dermal Fibroblasts Treated with Senescence-Modulating COX Inhibitors by Jeong A. Han, Jong-Il Kim

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Spatiotemporal analysis of Plasmodium falciparum erythrocyte binding antigen-175 gene dimorphism in Ghana by Abraham Y. Kpirikai, Belinda A. Ofosu, Josie N. A. Okai, Victor Kornu, Abdul Rashid Kassim, Esther Donkor, Frederica Malm, Osumanu Ahmed, Mona-Liza E. Sakyi, Samirah Saiid, Albert Yao Kudakpo, Charles Mensah, Francis Dzabeng, Collins Morang’a, Gordon A. Awandare, Yaw Aniweh, Lucas N. Amenga-Etego

“…Methods Parasite gDNA was extracted from archived Dried Blood Spots (DBS) prepared from 700 confirmed malaria-infected individuals and analysed for P. falciparum EBA-175 dimorphism. Selective eba-175 gene amplification via nested PCR and allele scoring using agarose gel electrophoresis for F, C and F/C alleles. …”
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A database on genes increasing resistance of wheat and relative species against pathogenic fungi by O. G. Smirnova, A. V. Kochetov

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Circadian Clock Gene Bmal1: A Molecular Bridge from AKI to CKD by Songyuan Yang, Zehua Ye, Lijia Chen, Xiangjun Zhou, Wei Li, Fan Cheng

“…Kidney function is influenced by circadian rhythms, with the circadian gene Bmal1 being vital in managing these cycles. …”
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IGN: Invariable gene set-based normalization for chromatin accessibility profile data analysis by Shengen Shawn Hu, Hai-Hui Xue, Chongzhi Zang

“…We present IGN (Invariable Gene Normalization), a method for ATAC-seq and DNase-seq data normalization. …”
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Mutations in the <i>A34R</i> gene increase the immunogenicity of vaccinia virus by S. N. Shchelkunov, T. V. Bauer, S. N. Yakubitskiy, A. A. Sergeev, A. S. Kabanov, S. A. Pyankov

“…As a result, it can cause a diminishing of the immune response after administration of attenuated virus to patients at standard doses. The gene for thymidine kinase is frequently used for insertion/inactivation of foreign genes and it causes virus attenuation. …”
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