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641
Barriers and Facilitators to the Preadoption of a Computer-Aided Diagnosis Tool for Cervical Cancer: Qualitative Study on Health Care Providers’ Perspectives in Western Cameroon
Published 2025-02-01“…Each interview was audio-recorded, transcribed, and independently coded by 2 researchers using the ATLAS.ti (Lumivero, LLC) software. The technology acceptance lifecycle framework guided the content analysis, focusing on the preadoption phases to examine the perceived acceptability and initial acceptance of the CAD tool in clinical workflows. …”
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642
Targeting HVEM-GPT2 axis: a novel approach to T cell activation and metabolic reprogramming in non-small cell lung cancer therapy
Published 2025-02-01“…Methods The lung cancer datasets for this study were directly downloaded from The Cancer Genome Atlas (TCGA). Single-cell data were sourced from the Tumor Immune Single-cell Hub (TISCH). …”
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643
Desafios da interprofissionalidade no Programa de Aperfeiçoamento Multiprofissional de Preceptores da Universidade Aberta do Sistema Único de Saúde
Published 2025-02-01“…A análise quantitativa utilizou o software gratuito Jamovi versão 1.6, enquanto os dados qualitativos foram analisados com o Atlas.ti versão 23. Resultados: A análise revelou predomínio de profissionais do sexo feminino (81,2%) e que a maioria dos cursistas (40%) trabalhava em serviços hospitalares. …”
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644
Identification of Potential lncRNAs and miRNAs as Diagnostic Biomarkers for Papillary Thyroid Carcinoma Based on Machine Learning
Published 2021-01-01“…The data of lncRNA, miRNA, and mRNA were downloaded from the Cancer Genome Atlas (TCGA) dataset, followed by functional analysis of differentially expressed mRNAs. …”
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645
Summer Research Internship Curriculum to Promote Self-Efficacy, Researcher Identity, and Peer-to-Peer Learning: Retrospective Cohort Study
Published 2025-02-01“…MethodsThe Human BioMolecular Atlas Program (HuBMAP) piloted the implementation of a web-based academic enrichment curriculum for the Summer 2023 Research Internship cohort, which was comprised of students from groups underrepresented in biomedical artificial intelligence research. …”
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646
A Novel Immune-Related lncRNA-Based Model for Survival Prediction in Clear Cell Renal Cell Carcinoma
Published 2021-01-01“…The transcription profile and clinical information were obtained from The Cancer Genome Atlas (TCGA). Immune-related gene sets and transcription factor genes were downloaded from GSEA website and Cistrome database, respectively. …”
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647
Integrating single-cell RNA-Seq and bulk RNA-Seq data to explore the key role of fatty acid metabolism in hepatocellular carcinoma
Published 2025-01-01“…Data procurement encompassed transcriptomic and clinical datasets from HCC patients, sourced from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) repositories. …”
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648
MAZ-mediated tumor progression and immune evasion in hormone receptor-positive breast cancer: Targeting tumor microenvironment and PCLAF+ subtype-specific therapy
Published 2025-02-01“…Methods: The study utilized single-cell RNA sequencing (scRNA-seq) data sourced from the Gene Expression Omnibus database and The Cancer Genome Atlas to analyze HR+BC and identify key cellular characteristics. …”
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649
Peer-assisted telemedicine hepatitis-C treatment for people who use drugs in rural communities: a mixed methods study
Published 2025-02-01“…Recordings were professionally transcribed for thematic analysis with a mixed deductive and inductive framework, using Atlas.ti. Patients were surveyed about their interactions and satisfaction with peers. …”
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650
EHMT2‐mediated R‐loop formation promotes the malignant progression of prostate cancer via activating Aurora B
Published 2025-01-01“…Methods Bioinformatic analyses were conducted to identify genes overexpressed in PCa tissues using The Cancer Genome Atlas (TCGA) and GEO datasets. Western blotting and immunohistochemistry assays were applied to determine the expression levels of euchromatic histone lysine methyltransferase 2 (EHMT2), pT232‐Aurora B and Cullin 3 (CUL3). …”
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651
CASC8 activates the pentose phosphate pathway to inhibit disulfidptosis in pancreatic ductal adenocarcinoma though the c-Myc-GLUT1 axis
Published 2025-01-01“…CASC8 expression and its clinical correlations were analyzed using data from The Cancer Genome Atlas (TCGA) and further verified by chromogenic in situ hybridization assay in PDAC tissues. …”
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652
Vivências de sofrimento moral por técnicos de Enfermagem na pandemia da COVID-19
Published 2025-01-01“…A coleta de dados se deu por meio de 14 entrevistas com técnicos de enfermagem que atuaram durante a pandemia da COVID-19 no estado de Minas Gerais, orientadas por roteiro semiestruturado e os dados foram submetidos à análise temática de conteúdo com auxílio do software ATLAS.ti. Resultados: os potenciais fatores desencadeadores de vivência de sofrimento moral, relacionam-se com o despreparo dos profissionais e das instituições e com o contexto de pandemia, indicando a existência de problemas morais evidenciados pela impotência de agir conforme o seu posicionamento ético- moral e a invisibilidade dos técnicos nos ambientes de trabalho. …”
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653
Prognostic significance of p27 in colorectal cancer: a meta-analysis and bioinformatics analysis
Published 2024-12-01“…In addition, we used Gene Expression Profiling Interactive Analysis (GEPIA), University of Alabama at Birmingham’s Cancer Data Analysis Portal (UALCAN), and the Human Protein Atlas (HPA) to validate our results.ResultsThrough an extensive examination of four prominent databases, a total of 21 original articles encompassing a cohort of 3,378 patients were identified. …”
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654
THE ROLE OF N. I. VAVILOV AND VIR’S SCIENTISTS IN DESERT RECLAMATION
Published 2018-06-01“…Employees of the Department of Perennial Forage Crop Genetic Resources of VIR took part in the mapping of arid areas and sustainable fodder plant distribution for the Internet publication “Interactive Agricultural Ecological Atlas of Russia and Neighboring Countries Economic Plants and their Diseases, Pests and Weeds.” …”
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655
Upregulated SAE1 Drives Tumorigenesis and Is Associated with Poor Clinical Outcomes in Breast Cancer
Published 2024-01-01“…Bioinformatics analysis was applied to analyze SAE1 expression in BC and normal breast tissues, its relationship with clinicopathologic characteristics and prognosis in BC patients, and data from the Cancer Genome Atlas database and Gene Expression Omnibus dataset. …”
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656
RSK1 is an exploitable dependency in myeloproliferative neoplasms and secondary acute myeloid leukemia
Published 2025-01-01“…Here, we establish a comprehensive transcriptional atlas across the spectrum of myeloproliferative neoplasms (MPN) and secondary acute myeloid leukemia (sAML) through RNA-sequencing of 158 primary samples encompassing CD34+ hematopoietic stem/progenitor cells and CD14+ monocytes. …”
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657
Glioma Image-Level and Slide-Level Gene Predictor (GLISP) for Molecular Diagnosis and Predicting Genetic Events of Adult Diffuse Glioma
Published 2024-12-01“…In this study, the Cancer Genome Atlas whole-slide images (WSIs) were used to train the model. …”
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658
A compendium of Amplification-Related Gain Of Sensitivity genes in human cancer
Published 2025-01-01“…We create a comprehensive map of dosage compensation in cancer by integrating expression and copy number profiles from over 8000 tumors in The Cancer Genome Atlas and cell lines from the Cancer Cell Line Encyclopedia. …”
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659
Autophagy activation in response to cigarette smoke: Exploring the disparity in laryngeal cancer incidence and outcomes between sexes in South Korea
Published 2025-02-01“…In addition, to explore the relationship between the level of autophagy-related gene expression and clinical features, female LC patients were compared with male patients through an analysis of data from The Cancer Genome Atlas (TCGA). Results: In the NHIS data analyses, male LC patients had an 11 times higher incidence than female patients, even after adjusting for smoking and age. …”
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660
Presenting a model to explain unfavorable risk and favorable risk according to psychological variables in predicting market fluctuations in the Iranian capital market.
Published 2024-09-01“…The method of data collection is referring to documents and semi-structured interviews. For data analysis, Atlas ti software was used to code the interviews. …”
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