Transcriptomics, single-cell sequencing and spatial sequencing-based studies of cerebral ischemia by Jiaming Liu, Tao Qing, Mei he, Liu Xu, Zhuxiang Wu, Meiting Huang, Zheyu Liu, Ye Zhang, Zisheng Li, Wenhui Yang, Junbo Liu, Jie Li

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Exploring the landscape of Parkinson’s disease transcriptomics: a quantitative review of research progress and future directions by Yiran Wang, Yiran Wang, Yiran Wang, Tong Li, Xiaoqing Zhang, Xiaoqing Zhang, Haoran Tai, Haoran Tai, Weihong Li, Weihong Li, Bingyin Su, Bingyin Su

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The single-cell transcription reveals the aberrant differentiation trajectory of chondrocytes in the intervertebral disc for congenital scoliosis by Junfeng Wang, Haodong Li, Dong Fu, Yiming Zheng, Chuang Qian, Lin Li, Maoxiang Qian, Dahui Wang

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Differentiation-associated ISG expression of NK cells in chronic viral infection by Franziska Keller, Robert Lorenz Chua, Timo Trefzer, Katharina Jechow, Liane Bauersfeld, Fabian Beier, Sagar, Özlem Sogukpinar, Giuseppe Rusignuolo, Marta Rizzi, Roland Eils, Andreas Pichlmair, Marco Binder, Bertram Bengsch, Christoph Neumann-Haefelin, Volker Lohmann, Tobias Boettler, Christian Conrad, Robert Thimme, Maike Hofmann

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IL-23 tunes inflammatory functions of human mucosal-associated invariant T cells by Laetitia Camard, Tharshana Stephen, Hanane Yahia-Cherbal, Vincent Guillemot, Sébastien Mella, Victoire Baillet, Hélène Lopez-Maestre, Daniele Capocefalo, Laura Cantini, Claire Leloup, Julie Marsande, Katherine Garro, Juan Sienes Bailo, Ambre Dangien, Natalia Pietrosemoli, Milena Hasan, Huimeng Wang, Sidonia B.G. Eckle, Anne M. Fourie, Carrie Greving, Barbara Joyce-Shaikh, Raphaelle Parker, Daniel J. Cua, Elisabetta Bianchi, Lars Rogge

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Blood immunomap for prediction of responses to anti-PD-1 immunotherapy in metastatic non-small cell lung cancer by Maria Semitekolou, Nikolaos Paschalidis, Domenico Lo Tartaro, Aikaterini Tsitsopoulou, Panagiota Stamou, Alexandros Mavroudis, Effrosyni Markaki, Athina Varveri, Ioannis Morianos, Matthieu Lavigne, Charalampos Fotsitzoudis, Sofia Magkouta, Konstantina Dede, Ioannis Kalomenidis, Konstantinos Samitas, Konstantinos Potaris, Andrea Cossarizza, Dimitrios Mavroudis, Sara De Biasi, Panayiotis Verginis

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BV/ODV-E26 is a conserved baculoviral inhibitory factor for optimizing viral virulence in lepidopteran hosts by Hiroyuki Hikida, Ryuhei Kokusho, Susumu Katsuma

Subjects: “…Transcriptomics…”
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Circadian synchronization differentially modifies cytokine-mediated transcriptomic remodeling and cell death in INS-1 cells and mouse islets by Phillip Alexander Keller Andersen, Rasmus H. Reeh, Isabel Sanders, Emilie Bender Overlund, Georgia Katsioudi, Cecilia Jiménez-Sánchez, Emil Zeng Skovhøj, Anniek Frederike Lubberding, Charna Dibner, Thomas Mandrup-Poulsen

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Interferon-gamma rescues dendritic cell calcineurin-dependent responses to Aspergillus fumigatus via Stat3 to Stat1 switching by Amit Adlakha, Thomas J. Williams, Xinxin Shou, Anna K. Reed, Boris Lenhard, Darius Armstrong-James

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Landscape of extracellular small RNA and identification of biomarkers in multiple human cancers by Shoubin Zhan, Ye Xu, Botao Li, Peng Ge, Chunwu Zhang, Shengkai Zhou, Tingting Yang, Gaoli Liang, Ling Ji, Xiangbin Kong, Ping Yang, Xi Chen, Chen-Yu Zhang, Han Shen, Xu Luo, Zhen Zhou, Yanbo Wang

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Transcriptomic signatures of neonatal acute respiratory distress syndrome in a prospective cohort of respiratory distress by Chan Liu, Qing Ai, Jingli Yang, Ying Fan, Wen Jia, Leyu Si, Yuting Yao, Feifan Chen, Shiyue Liu, Yu He, Yuan Shi

Subjects: “…Transcriptomics…”
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DAXX-dependent H3.3 deposition maintains myoblast cell identity independently of other histone chaperone complexes by Virginia Zoglio, Sarah Chebouti, Fayez Issa, Frédéric Relaix, Joana Esteves de Lima

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Role of immunosuppressive JNK pathway in the tumor microenvironment among TNBC subtypes in IBCSG trial 22-00 by Andrea Joaquin Garcia, Takashi Semba, Mattia Rediti, Daniel J. McGrail, Xuemei Xie, Xiaoping Wang, Dileep R. Rampa, David Venet, Laurence Buisseret, Samira Majjaj, Roswitha Kammler, Marco Colleoni, Sherene Loi, Giuseppe Viale, Meredith M. Regan, Françoise Rothé, Christos Sotiriou, Naoto T. Ueno

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spVelo: RNA velocity inference for multi-batch spatial transcriptomics data by Wenxin Long, Tianyu Liu, Lingzhou Xue, Hongyu Zhao

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Single-cell and spatial transcriptomic analysis reveals tumor cell heterogeneity and underlying molecular program in colorectal cancer by Teng Wang, Zhaoming Chen, Wang Wang, Wang Wang, Heng Wang, Shenglong Li

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Integrative single-cell and spatial transcriptomics analysis reveals MDK-NCL pathway’s role in shaping the immunosuppressive environment of lung adenocarcinoma by Yu Fu, Song Li, Yikang Zhao, Xiran Zhang, Xiaolu Mao, Ran Xu

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Single-cell and spatial transcriptomics in endocrine research by Ryusaku Matsumoto, Takuya Yamamoto

Subjects: “…single-cell transcriptomics…”
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Identifying molecular targets for modulating carotenoid accumulation in rice grains by Rakshana Palaniswamy, Rohit Kambale, Vignesh Mohanavel, Veera Ranjani Rajagopalan, Sudha Manickam, Raveendran Muthurajan

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An Integrated Approach Involving Metabolomics and Transcriptomics Reveals Arsenic-Induced Toxicity in Human Renal Cells by Lin Rong, Xinxin Liang, Xingfang Zhang, Yajun Qiao, Guoqiang Li, Yuancan Xiao, Hongtao Bi, Lixin Wei

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Transcriptomic Analysis of Peripheral Blood Mononuclear Cells in Hyperuricemia and Gout by Valentin NICA, Medeea BADII, Orsolya GAAL, Georgiana CABĂU, Andreea-Manuela MIREA, Ioana HOTEA, Cristina PAMFIL, Simona REDNIC, Radu A. POPP, Yang LI, Tania O. CRIŞAN, Leo A.B. JOOSTEN

Subjects: “…Transcriptomics…”
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