Exploring the Latent Information in Spatial Transcriptomics Data via Multi‐View Graph Convolutional Network Based on Implicit Contrastive Learning by Sheng Ren, Xingyu Liao, Farong Liu, Jie Li, Xin Gao, Bin Yu

Subjects: “…spatial transcriptomics…”
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Transcriptomics analysis identifies critical genes involved in the infection of crandell-reese feline kidney cell lines by feline panleukopenia virus by Shengnan SONG, Pan CHEN, Chuangfu CHEN, Jia GUO

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Gradient boosting reveals spatially diverse cholesterol gene signatures in colon cancer by Xiuxiu Yang, Debolina Chatterjee, Justin L. Couetil, Ziyu Liu, Valerie D. Ardon, Chao Chen, Jie Zhang, Kun Huang, Kun Huang, Kun Huang, Travis S. Johnson, Travis S. Johnson, Travis S. Johnson

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Tcf4 regulates secretory cell fate decisions in the small intestine and colon tumors: insights from transcriptomic, histological, and microbiome analyses by Lucie Janeckova, Monika Stastna, Dusan Hrckulak, Linda Berkova, Jan Kubovciak, Jakub Onhajzer, Vitezslav Kriz, Stela Dostalikova, Tereza Mullerova, Katerina Vecerkova, Marketa Tenglerova, Stepan Coufal, Klara Kostovcikova, Richard S. Blumberg, Dominik Filipp, Konrad Basler, Tomas Valenta, Michal Kolar, Vladimir Korinek

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Multi-omics analysis links NFKB1 activation to poor immunosuppressive therapy response in acquired aplastic anemia by Nianbin Li, Ting Wang, Boyi Wang, Rong Fu

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Single nuclear‐spatial transcriptomic sequencing reveals distinct puncture‐induced cell subpopulations in the intervertebral disc of a rat model by Guoyan Liang, Jing Tan, Chong Chen, Yuying Liu, Yongyu Ye, Xiaolin Pan, Qiujian Zheng, Yunbing Chang, Feng‐Juan Lyu

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Metabolic and Transcriptomic-Based Characterization of <i>Streptococcus salivarius</i> ssp. <i>thermophilus</i> Snew Fermentation in Milk by Ye Wang, Haijie Zhao, Huilin Zhang, Baochao Hou, Weilian Hung, Jian He, Chao Liang, Baolei Li, Chaoxin Man, Yujun Jiang, Yu Zhang, Ling Guo

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Identification of Transcriptomic Differences in Induced Pluripotent Stem Cells and Neural Progenitors from Amyotrophic Lateral Sclerosis Patients Carrying Different Mutations: A Pi... by Chiara Sgromo, Martina Tosi, Cristina Olgasi, Fabiola De Marchi, Francesco Favero, Giorgia Venturin, Beatrice Piola, Alessia Cucci, Lucia Corrado, Letizia Mazzini, Sandra D’Alfonso, Antonia Follenzi

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Impact of SARS-CoV-2 Variant NSP6 on Pathogenicity: Genetic Analysis and Cell Biology by Yangye Gao, Peng Ni, Yanqiao Hua, Shuaiyin Chen, Rongguang Zhang

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The Progression of Mycosis Fungoides During Treatment with Mogamulizumab: A BIO-MUSE Case Study of the Tumor and Immune Response in Peripheral Blood and Tissue by Angelica Johansson, Eirini Kalliara, Emma Belfrage, Teodor Alling, Paul Theodor Pyl, Anna Sandström Gerdtsson, Urban Gullberg, Anna Porwit, Kristina Drott, Sara Ek

Subjects: “…spatially resolved transcriptomics…”
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EM Dipeptide Enhances Milk Protein Secretion: Evidence from Integrated Metabolomic and Transcriptomic Analysis by Yuqing Liu, Yuhao Yan, Runjun Yang, Xiaohui Li, Chuang Zhai, Xuan Wu, Xibi Fang, Boqun Liu

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Study on the dynamics of fruits color related genes and metabolites during the fruit development of Zanthoxylum bungeanum ‘Hanyuan’ by Yafang Zhai, Kai Wang, Jiaojiao Wu, Wenkai Hui, Shuaijie Lu, Jing Qiu, Han Wu, Wei Gong, Jingyan Wang

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Ocean acidification induces changes in circadian alternative splicing profiles in a coral reef fish by Sneha Suresh, Michael Jarrold, Timothy Ravasi, Philip L. Munday, Celia Schunter

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2-Nonanol produced by Bacillus velezensis EM-1: a new biocontrol agent against tobacco brown spot by Xiaona Sui, Xiaobin Han, Xianbo Wang, Jun Wan, Mingxia Wen, Donglin Zhao, Yanfen Zheng, Chengsheng Zhang, Chuantao Xu, Youqiang Wang

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Combined Network Pharmacology, Transcriptomics and Metabolomics Strategies Reveal the Mechanism of Action of Lang Chuang Wan to Ameliorate Lupus Nephritis in MRL/lpr Mice by Cuicui Li, Guoxin Ji, Xinru Zhang, Hang Yu, Zhimeng Li, Bo Yang, Zhuangzhuang Yao, Shilei Wang, Tongwei Jiang, Shumin Wang

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Human-augmented large language model-driven selection of glutathione peroxidase 4 as a candidate blood transcriptional biomarker for circulating erythroid cells by Bishesh Subba, Mohammed Toufiq, Fuadur Omi, Marina Yurieva, Taushif Khan, Darawan Rinchai, Karolina Palucka, Damien Chaussabel

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Transcriptomic analysis reveals candidate molecular pathways involved in pea (Pisum sativum L.) resistance to pea aphid (Acyrthosiphon pisum Harris) biotypes by Rémi Ollivier, Stéphanie Robin, Marc Galland, Po-Yuan Shih, Stéphanie Morlière, Maria K. Paulmann, Jonathan Gershenzon, Grit Kunert, Marie-Laure Pilet-Nayel, Jean-Christophe Simon, Akiko Sugio

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Optimizing the Bioprocesses of Bacteriocin Production in <i>Lacticaseibacillus paracasei</i> HD1.7 by the “Acetate Switch”: Novel Insights into the Labor Division Between Energy Me... by Weige Yao, Rui Sun, Wen Zhang, Jie Kang, Zhenchao Wu, Liangyang Mao, Ying Yang, Shuo Li, Gang Song, Jingping Ge, Wenxiang Ping

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Intercellular communication between FAP+ fibroblasts and SPP1+ macrophages in prostate cancer via multi-omics by Tingting Wu, Xinyu Li, Fei Zheng, Hanchao Liu, Yang Yu

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Enhancing Pacific white shrimp immunity against Vibrio parahaemolyticus through β-glucan supplementation from marine diatoms by Chettupon Pooljun, Pitchanee Jariyapong, Patcharapon Laksana-aut, Ikuo Hirono, Suwit Wuthisuthimethavee

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