Application of Spatial Transcriptomics in Digestive System Tumors by Bowen Huang, Yingjia Chen, Shuqiang Yuan

Subjects: “…spatial transcriptomics…”
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Spatial transcriptomic analysis of 4NQO-induced tongue cancer revealed cellular lineage diversity and evolutionary trajectory by Feng Liu, Feng Liu, Xiaojun Wu, Shaoqing Yu, Deqiang Cheng, Jun Pan, Xiaodong Wang, Guanzhen Yu, Guanzhen Yu, Chaofu Li

Subjects: “…spatial transcriptomics…”
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stGuide advances label transfer in spatial transcriptomics through attention-based supervised graph representation learning by Yupeng Xu, Hao Dai, Jinwang Feng, Keren Xu, Qiu Wang, Pingting Gao, Chunman Zuo, Chunman Zuo

Subjects: “…spatial transcriptomics…”
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Single-cell and spatial transcriptome profiling reveal CTHRC1+ fibroblasts promote EMT through WNT5A signaling in colorectal cancer by Yunfei Lu, Yang Chen, Zhenling Wang, Hengyang Shen, Lei Xu, Changzhi Huang, Ying Tong, Yu Shao, Hongqiang Zhang, Zan Fu

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Heterogenous cancer-associated fibroblasts related tumor microenvironment marked by CD10/KLF4/TIAM1 were identified in pancreatic adenocarcinoma by integrated transcriptomics by Yu Wan, Yu Wan, Yu Wan, Qiong Hu, Kai Sun, Jing Shi, Limei Liu, Xiangsong Zhang, Jianjun Huang, Chulan Gong, Jinting Liu, Haijiu Wang, Jun Yan, Jun Yan

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Deciphering the role of acetylation-related gene NAT10 in colon cancer progression and immune evasion: implications for overcoming drug resistance by Xuancheng Zhou, Xun Sang, Lai Jiang, Shengke Zhang, Chenglu Jiang, Yuheng Gu, Yipin Fu, Guanhu Yang, Jieyin Zhang, Hao Chi, Binbin Wang, Xiaolin Zhong

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Three-dimensional single-cell transcriptome imaging of thick tissues by Rongxin Fang, Aaron Halpern, Mohammed Mostafizur Rahman, Zhengkai Huang, Zhiyun Lei, Sebastian J Hell, Catherine Dulac, Xiaowei Zhuang

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Deciphering spatially confined immune evasion niches in osteosarcoma with 3-D spatial transcriptomics: a literature review by Guangqiang Qiu, Yongcheng Tang, Junhui Zuo, Heng Wu, Yongxian Wan

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Multi-omics characterization of oncosis in spinal cord injury by Zhipeng Jiang, Youwei Guo, Zihan Wang, Jinhao Ouyang, Hailong Huang, Haoxuan Huang, Tianqian Shen, Lei Wang, Wen Yin, Xingjun Jiang, Caiping Ren

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Molecular Lineages and Spatial Distributions of Subplate Neurons in the Human Fetal Cerebral Cortex by Xueyu Guo, Trevor Lee, Jason Sun, Julianne Sun, Wenjie Cai, Qingwei Yang, Tao Sun

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Organizational Principles of the Primate Cerebral Cortex at the Single‐Cell Level by Renrui Chen, Pengxing Nie, Liangxiao Ma, Guang‐Zhong Wang

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Defining Keypoints to Align H&E Images and Xenium DAPI-Stained Images Automatically by Yu Lin, Yan Wang, Juexin Wang, Mauminah Raina, Ricardo Melo Ferreira, Michael T. Eadon, Yanchun Liang, Dong Xu

Subjects: “…spatial transcriptomics…”
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Unveiling migraine subtype heterogeneity and risk loci: integrated genome-wide association study and single-cell transcriptomics discovery by Shuxu Wei, Yan Quan, Xinyi Li, Suiqin Zhong, Ling Xiao, Chao Yang, Ronghuai Shen, Xiaojia Lu, Lingbin He, Youti Zhang, Xianxi Huang

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Topic modeling analysis of the Allen Human Brain Atlas by Letizia Pizzini, Filippo Valle, Matteo Osella, Michele Caselle

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Correction: Single-cell and spatial transcriptomics reveal a stress-induced EMT-like epithelial subset driving immune activation in silica-injured lung by Tao Wang, Tao Wang, Tao Wang, Jianfeng Hao, Bing Li, Bing Li, Ahjol Hyraht, Jialing Wang, Jialing Wang, Henglei Xia, Qingbin Wu, Wei Gao, Congxia Chen, Chuanqing Yu, Xiuqun Gong, Ting Li, Mei Zhang, Mei Zhang, Mei Zhang, Yinghai Xie, Xinrong Tao, Xinrong Tao, Xinrong Tao

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Winnow-KAN: single-cell RNA-seq location recovery with small-gene-set spatial transcriptomics by Yuyang Zhang, Qihuang Zhang

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Transcriptomic characterization of transitioning cell types in the skin of Atlantic salmon by R. Ruiz Daniels, S. J. Salisbury, L. Sveen, P. R. Villamayor, R. S. Taylor, M. Vaadal, T. Tengs, A. Krasnov, S. J. Monaghan, M. Ballantyne, C. Penaloza, M. D. Fast, J. E. Bron, R. Houston, N. Robinson, D Robledo

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Single-cell and spatial transcriptomics reveal a stress-induced EMT-like epithelial subset driving immune activation in silica-injured lung by Tao Wang, Tao Wang, Tao Wang, Jianfeng Hao, Bing Li, Bing Li, Ahjol Hyraht, Jialing Wang, Jialing Wang, Henglei Xia, Qingbin Wu, Wei Gao, Congxia Chen, Chuanqing Yu, Xiuqun Gong, Ting Li, Mei Zhang, Mei Zhang, Mei Zhang, Yinghai Xie, Xinrong Tao, Xinrong Tao, Xinrong Tao

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Single‐Cell and Spatial Transcriptomics Reveals a Stereoscopic Response of Rice Leaf Cells to Magnaporthe oryzae Infection by Wei Wang, Xianyu Zhang, Yong Zhang, Zhe Zhang, Chang Yang, Wen Cao, Yuqin Liang, Qinzheng Zhou, Qian Hu, Yimai Zhang, Yu Wang, Yingying Xing, Wenfeng Qian, Nan Yao, Ning Xu, Jun Liu

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Integrated multi-omics analysis reveals the immunotherapeutic significance of tumor cells with high FN1 expression in ovarian cancer by Xinyi Zhang, Zhikai Xiahou, Fu Zhao, Qing Wu, Wei Nie, Shouyan Wang

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