HIPSD&R-seq enables scalable genomic copy number and transcriptome profiling by Jan Otoničar, Olga Lazareva, Jan-Philipp Mallm, Milena Simovic-Lorenz, George Philippos, Pooja Sant, Urja Parekh, Linda Hammann, Albert Li, Umut Yildiz, Mikael Marttinen, Judith Zaugg, Kyung Min Noh, Oliver Stegle, Aurélie Ernst

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Single-cell protein-DNA interactomics and multiomics tools for deciphering genome regulation by Xiong Haiqing, Wang Runyu, He Aibin

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Microbiome Single Cell Atlases Generated with a Commercial Instrument by Xiangpeng Li, Linfeng Xu, Benjamin Demaree, Cecilia Noecker, Jordan E. Bisanz, Daniel W. Weisgerber, Cyrus Modavi, Peter J. Turnbaugh, Adam R. Abate

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Exploring Core Genes Associated with Sepsis and Systemic Inflammatory Response Syndrome Using Single-Cell Sequencing Technology by Shen Y, Leng L, Hu Y

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SEE: A Method for Predicting the Dynamics of Chromatin Conformation Based on Single‐Cell Gene Expression by Minghong Li, Yurong Yang, Rucheng Wu, Haiyan Gong, Zan Yuan, Jixin Wang, Erping Long, Xiaotong Zhang, Yang Chen

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Single-Cell RNA Sequencing and Combinatorial Approaches for Understanding Heart Biology and Disease by Le Wang, Bo Jin

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Multi-omics single-cell analysis reveals key regulators of HIV-1 persistence and aberrant host immune responses in early infection by Dayeon Lee, Sin Young Choi, So-I Shin, Hyunsu An, Byeong-Sun Choi, Jihwan Park

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Submicron infrared spectroscopy assessment of single-cell phenotypic diversity in microbial lipid production by Uladzislau Blazhko, Dana Byrtusová, Volha Shapaval, Achim Kohler, Christophe Sandt, Boris Zimmermann

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Single cell transcriptomics in blood of patients with chronic obstructive pulmonary disease by Yeonjeong Heo, Jeeyoung Kim, Seok-Ho Hong, Woo Jin Kim

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Protocol for single-cell dissociation of head and neck cancer organoids by Matthew Spence, Isabel Cioffi, Yasuto Tomita, Samuel Flashner, Cecilia Martin, Hiroshi Nakagawa, Anuraag S. Parikh

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Protocol for real-time glycolytic monitoring in mammalian cells using confocal microscopy and HYlight, a biosensor for fructose 1,6-bisphosphate by Israel Pérez-Chávez, Nicolas Baeyens, Daria Ezeriņa, Esteban N. Gurzov, Joris Messens

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Understanding Atherosclerotic Plaque Cellular Composition: Recent Advances Driven by Single Cell Omics by Esra Cetin, Anne-Catherine Raby

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EmptyDropsMultiome discriminates real cells from background in single-cell multiomics assays by Stathis Megas, Valentina Lorenzi, John C. Marioni

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Single-cell analysis reveals the spatiotemporal effects of long-term electromagnetic field exposure on the liver by Mingming Zhang, Zhichun Lv, Lingping Zhao, Quan Zeng, Yunqiang Wu, Junnian Zhou, Jiafei Xi, Xuetao Pei, Haiyang Wang, Changyan Li, Wen Yue

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Advances in Microfluidic Single-Cell RNA Sequencing and Spatial Transcriptomics by Yueqiu Sun, Nianzuo Yu, Junhu Zhang, Bai Yang

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Two-Stage Bioconversion of Cellulose to Single-Cell Protein and Oil via a Cellulolytic Consortium by Eric Charles Peterson, Christian Hermansen, Ashriel Yong, Rowanne Siao, Gi Gi Chua, Sherilyn Ho, Coleen Toledo Busran, Megan Teo, Aaron Thong, Melanie Weingarten, Nic Lindley

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Protocol for interpretable and context-specific single-cell-informed deconvolution of bulk RNA-seq data by Daniele Malpetti, Francesca Mangili, Marco Bolis, Anna Rinaldi, David Legouis, Lorenzo Ruinelli, Pietro Cippà, Laura Azzimonti

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Combined analysis of single-cell and bulk transcriptome sequencing data identifies critical glycolysis genes in idiopathic pulmonary arterial hypertension by Xuan Gao, Youli Fan, Guijia Wang, Jiangjiang Xu, Runwei Deng, Jiangwei Song, Binfeng Sun, Yongbing Wang, Zixuan Wu, Ruyi Jia, Jing Huang, Huiyu He, Lei Gao, Yihao Zhang, Na Sun, Bingxiang Wu

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A Single-Cell Perspective on the Effects of Dopamine in the Regulation of HIV Latency Phenotypes in a Myeloid Cell Model by Liana V. Basova, Wei Ling Lim, Violaine Delorme-Walker, Tera Riley, Kaylin Au, Daniel Siqueira Lima, Marina Lusic, Ronald J. Ellis, Howard S. Fox, Maria Cecilia Garibaldi Marcondes

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Protocol for conducting a single-cell sequencing assay for transposase-accessible chromatin analysis by Wen Ma, Peiyao Ma, Yue Yuan, Dandan Hu, Kaifeng Li, Pengfei Cai, Chuanyu Liu

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