The Computer‐Assisted Sequence Annotation (CASA) workflow for enzyme discovery by Gemma R. Takahashi, Franchesca M. Cumpio, Carter T. Butts, Rachel W. Martin

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Rore: robust and efficient antioxidant protein classification via a novel dimensionality reduction strategy based on learning of fewer features by Chaolu Meng, Yongqi Hou, Quan Zou, Lei Shi, Xi Su, Ying Ju

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ProtAlign-ARG: antibiotic resistance gene characterization integrating protein language models and alignment-based scoring by Shafayat Ahmed, Muhit Islam Emon, Nazifa Ahmed Moumi, Lifu Huang, Dawei Zhou, Peter Vikesland, Amy Pruden, Liqing Zhang

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Challenges in adjusting scoring matrices when comparing functional motifs with non-standard compositions by Patryk Jarnot

Subjects: “…Protein sequence…”
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LPBERT: A Protein–Protein Interaction Prediction Method Based on a Pre-Trained Language Model by An Hu, Linai Kuang, Dinghai Yang

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A multimodal model for protein function prediction by Yu Mao, WenHui Xu, Yue Shun, LongXin Chai, Lei Xue, Yong Yang, Mei Li

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iSeqSearch: incremental protein search for iBlast/iMMSeqs2/iDiamond by Hyunwoo Yoo, Mohammadsaleh Refahi, Robi Polikar, Bahrad A. Sokhansanj, James R. Brown, Gail L. Rosen

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Prediction and validation of nanowire proteins in Oleidesulfovibrio alaskensis G20 using machine learning and feature engineering by Dheeraj Raya, Vincent Peta, Alain Bomgni, Shiva Aryal, Tuyen Duc Do, Kalimuthu Jawaharraj, David R. Salem, Venkataramana Gadhamshetty, Saurabh Sudha Dhiman, Etienne Z. Gnimpieba

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Protein sequence classification using natural language processing techniques by Huma Perveen, Julie Weeds

Subjects: “…Protein sequence classification…”
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Targeted protein editing technique in living mammalian cells by peptide-fused PNGase by Min Wu, Guijie Bai, Ziyi Zhang, Haixia Xiao, Wenliang Sun, Chaoguang Tian

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Classification of Biological Data using Deep Learning Technique by Azha Javed, Muhammad Javed Iqbal

Subjects: “…Deep learning, 1D Convolution neural network, Protein sequences classification…”
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Adaptive Fuzzy C-Means with logit boost distributed clustering for cancer detection with protein sequences by K. Thenmozhi, M. Pyingkodi, V. S. Prakash, Kripa Josten, S. Manju Priya, J. Vennila

Subjects: “…Protein sequences…”
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