getphylo: rapid and automatic generation of multi-locus phylogenetic trees by T. J. Booth, S. Shaw, P. Cruz-Morales, T. Weber

“…To address this, we created getphylo, a python tool for the rapid generation of phylogenetic trees de novo from annotated sequences. Results We present getphylo (Genbank to Phylogeny), a tool that automatically builds phylogenetic trees from annotated genomes alone. …”
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Cancer phylogenetic tree inference at scale from 1000s of single cell genomes by Salehi, Sohrab, Dorri, Fatemeh, Chern, Kevin, Kabeer, Farhia, Rusk, Nicole, Funnell, Tyler, Williams, Marc J., Lai, Daniel, Andronescu, Mirela, Campbell, Kieran R., McPherson, Andrew, Aparicio, Samuel, Roth, Andrew, Shah, Sohrab P., Bouchard-Côté, Alexandre

“…Moreover, we introduce a novel point mutation calling method that incorporates the CN data and the underlying phylogenetic tree to overcome the low per-cell coverage of scWGS. …”
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Identification and Phylogenetic Tree Determination of Spodoptera frugiperda from Java Based on mtDNA COI Sequence Analysis by Ani Widarti, Enie Tauruslina, Idah Faridah, Willing Bagariang, Hadi Suyanto, Didah Mahmudah, Rista Susanti, Rosalia Maryana, Carwika Carwika

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Morphological and molecular characterization of Stenocranus pacificus (Hemiptera: Delphacidae) on maize plants by Anivea Fachmi, Dita Megasari, Ramadhani Mahendra Kusuma

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GENETIC VARIABILITY AND DROUGHT PARAMETERS AMONG SOME GRAIN SORGHUM GENOTYPES USING QUANTITATIVE TRAITS AND RAPD MARKERS by Bahaa A. Zarea, M.E.M. El-Sagheer, H.M. Hafez, A.Y.M. Ahmed

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Isolation and Antifungal Susceptibility of Candida spp. from Pediatric Patients in Kurdistan of Iraq by Mohammed Salah Bahi, Khattab Ahmed Mustafa Shekhany

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CysQ of , a Protozoa, May Have Been Acquired from Bacteria by Horizontal Gene Transfer by Ji Young Lee, Sangsoo Kim

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Gene Expression Analysis of Deduced Protein Sequence from the FLOWERING LOCUS C (FLC) Homolog during Vegetative and Reproductive Phases in Lepidium sativum L. by Parissa Jonoubi, Farkhondeh Rezanejad, Fatemeh Mahyapoor

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On the nature of picobirnaviruses by A. Yu. Kashnikov, N. V. Epifanova, N. A. Novikova

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Phylogenetic analysis of dermatophytes isolated from small domestic animals by A. M. Smagulova, E. V. Kukhar, T. I. Glotova, A. G. Glotov

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Phylogenetic Analysis of Spike and Envelope Proteins for a Number of Bat Coronaviruses for Understanding the Hypothesis of Possible Origin for the Novel 2019- nCoV by Salar Ibrahim Ali

Subjects: “…COVID-19, Rousettus bat, Bat coronaviruses, Phylogenetic tree analysis, Amino acid alignments.…”
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Comparative Study of <i>Phytolacca</i> Species Through Morphological, Chloroplast Genome, and Phylogenetic Analysis by Sumin Jeong, Yeseul Kim, Heewon Ji, Jun-Ho Song, Inkyu Park

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Bacterial diversity determination using culture-dependent and culture-independent methods by M. Ghiasian, A. Akhavan Sepahy, M.A. Amoozegar, S. Saadatmand, M. Shavandi

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Characterisation of Fourteen Accessions of Trichosanthes cucumerina from Nigeria Using Internal Transcribed Spacer by Ann Osuagwu, Celestine Uzoma Aguoru, Lucky Osabuohien Omoigui, Joseph Olalekan Olasan

“…The phylogenetic tree of the characterization grouped T.cucumerina into three clusters. …”
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Molecular and morphology identification of Squat lobster (Family Galatheidae) in Seribu Islands, Jakarta by Amanda Siregar Raissha, Putri Anggraini Nurlita, Restiana Endang Gelis Ester, Suryo Kusumo Bagus, Subhan Beginer, P Zamani Neviaty, Madduppa Hawis, Najwa Khalilah

“…The purpose of this study was to identify squat lobsters on dead coral in the Seribu Islands, Jakarta through phylogenetic tree reconstruction based on molecular and morphological identification. …”
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Genomic analysis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strains isolated in Malaysia by Hooi-Leng Ser, Loh Teng-Hern Tan, Jodi Woan-Fei Law, Vengadesh Letchumanan, Nurul-Syakima Ab Mutalib, Learn-Han Lee

“… Using seven complete genomes of human SARS-CoV-2 (retrieved from GISAID) isolated in Malaysia for phylogenetic tree construction, the current study showed that these strains formed four distinct clades when compared with other representative strains from Asia, Europe and US. …”
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Investigating the formation and evolution of plant diversity patterns in the Qiangtang Plateau based on phylofloristics approach by Xiaoping Li, Yun Han, Lei Miao, Hao Xu, Jingya Yu, Shuang Han, Faqi Zhang

“…We quantified the PD of the Qiangtang Plateau flora utilizing a macro-phylogenetic tree derived from a plant list of 370 species. …”
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The first complete mitochondrial genome sequence of the common Baya weaverbird (Ploceus philippinus) from southern India by Venkatesh Nagarajan-Radha, Subanithi-Purnima Murugan, Paramanantha Swami Doss Devaraj

“…A maximum-likelihood phylogenetic tree analysis placed P. philippinus and P. nigricollis weaverbirds in a separate clade among other bird species. …”
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Geoglossum subdifforme sp. nov. and G. simile, Two New Earth Tongues from South Korea by Chang Sun Kim, Young-Nam Kwag, Dae Ho Kim

“…The two species were identified to belong to the genus Geoglossum; the species G. simile and a new species named G. subdifforme sp. nov. The phylogenetic tree constructed using the ITS region showed that G. subdifforme is closely related to G. difforme. …”
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Review and Phylogenetic Evaluation of Associations between Microdontinae (Diptera: Syrphidae) and Ants (Hymenoptera: Formicidae) by Menno Reemer

“…The taxa of Microdontinae found in association with ants occur scattered throughout their phylogenetic tree. One of the supposedly most basal taxa (Mixogaster) is associated with ants, suggesting that associations with ants evolved early in the history of the subfamily and have remained a predominant feature of their lifestyle. …”
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