Comparative pathogenomics of Clostridium tetani. by Jonathan E Cohen, Rong Wang, Rong-Fong Shen, Wells W Wu, James E Keller

Get full text

Beyond the Basics: Taxonomic Classification and Pathogenomics in Recently Discovered <i>Dickeya dadantii</i> Isolates by Mateus Sudario Pereira, Diego Lucas Neres Rodrigues, Juan Carlos Ariute, Douglas Vinícius Dias Carneiro, Pedro Alexandre Sodrzeieski, Marco Aurélio Siqueira Gama, Elineide Barbosa de Souza, Vasco Azevedo, Bertram Brenig, Ana Maria Benko-Iseppon, Flavia Figueira Aburjaile

Get full text

Multiscale comparative pathogenomic analysis of Vibrio anguillarum linking serotype diversity, genomic plasticity and pathogenicity by Khandker Shahed, Ashim Chakma, Omar Hamza Bin Manjur, Sk Injamamul Islam

Get full text

In Silico Characterization of Resistance and Virulence Genes in <i>Aeromonas jandaei</i> Strains Isolated from <i>Oreochromis niloticus</i> in Brazil by Marcela Laryssa Oliveira Duarte, Diego Lucas Neres Rodrigues, Gabryel Bernardo Vieira de Lima, Juan Carlos Ariute, Gisele Veneroni Gouveia, João José de Simoni Gouveia, Vasco Azevedo, Bertram Brenig, Eric Guédon, Guilherme Campos Tavares, Mateus Matiuzzi da Costa, Ulisses de Pádua Pereira, Flávia Figueira Aburjaile

Subjects: Get full text

Unraveling the pathogenomics of Rhizoctonia solani infecting proso millet (Panicum miliaceum L.): genomic perspective on ruthless virulence and adaptive evolution by Prasanna S. Koti, T. S. S. K. Patro, K. B. Palanna, B. Jeevan, Porapu Prasanth, G. V. Ramesh, N. Anuradha, Y. Sandhya Rani, Ungata Triveni, K. Lavanya Devi, T. Tharana Poonacha, Farooq Khan, Boda Praveen, M. Divya, D. Sabina Mary, V. Prasanna Kumari, T. E. Nagaraja, R. Madhusudhana, C. Tara Satyavathi

“…This study on the pathogenomics of R. solani seeks to unravel its genetic mechanisms, identify key virulence factors, decode host-pathogen interactions, and pinpoint molecular targets for effective control strategies.MethodsR. solani isolates were collected from various regions across India, resulting in six distinct isolates. …”
Get full text

Pathogenomic Insights into <i>Piscirickettsia salmonis</i> with a Focus on Virulence Factors, Single-Nucleotide Polymorphism Identification, and Resistance Dynamics by Sk Injamamul Islam, Khandker Shahed, Md Imtiaz Ahamed, Luu Tang Phuc Khang, Won-Kyo Jung, Papungkorn Sangsawad, Nguyen Dinh-Hung, Patima Permpoonpattana, Nguyen Vu Linh

Get full text

Pathogenomic Insights into <i>Xanthomonas oryzae</i> pv. <i>oryzae</i>’s Resistome, Virulome, and Diversity for Improved Rice Blight Management by Peter Adeolu Adedibu, Oksana Son, Liudmila Tekutyeva, Larissa Balabanova

“…Developing effective control strategies requires an up-to-date understanding of its pathogenomics. This study analyzes the genomes of 30 <i>X. oryzae</i> strains collected from rice-producing regions across five continents to identify genetic elements critical for its pathogenicity and adaptability and for an intraspecific diversity assessment using advanced genomics and bioinformatics tools. …”
Get full text

Profiling the Genomes and Secreted Effector Proteins in <i>Phytopythium vexans</i> Global Strains by Oscar Villanueva, Hai D. T. Nguyen, Walid Ellouze

Subjects: Get full text

Comparative Genomic and Secretome Analysis of <i>Phytophthora capsici</i> Strains: Exploring Pathogenicity and Evolutionary Dynamics by Oscar Villanueva, Hai D. T. Nguyen, Walid Ellouze

Subjects: Get full text

Pathogenomic Characterization of Multidrug-Resistant <i>Escherichia coli</i> Strains Carrying Wide Efflux-Associated and Virulence Genes from the Dairy Farm Environment in Xinjiang, China by Muhammad Shoaib, Sehrish Gul, Sana Majeed, Zhuolin He, Baocheng Hao, Minjia Tang, Xunjing Zhang, Zhongyong Wu, Shengyi Wang, Wanxia Pu

“…Then, we performed whole genome sequencing (WGS) on the Illumina NovaSeq PE150 platform and conducted pathogenomic analysis using multiple bioinformatics tools. …”
Get full text

Evaluation of the role of whiB6 and kdpDE in the dominant multidrug-resistant clone Mycobacterium tuberculosis B0/W148 by Isabelle Bonnet, Mickael Orgeur, Florence Brossier, Fadel Sayes, Wafa Frigui, Jan Madacki, Hugo Varet, Aurélie Chauffour, Alexandra Aubry, Nicolas Veziris, Wladimir Sougakoff, Roland Brosch, Régis Tournebize

Get full text

Speeding up drug susceptibility testing in Mycobacterium tuberculosis using RNA biomarkersResearch in context by Amandine Sury, Margo Maex, Alain Baulard, Roby P. Bhattacharyya, Stéphanie Depickère, Deborah T. Hung, Paul Cos, Fadel Sayes, Wafa Frigui, Roland Brosch, Vanessa Mathys, Elizabeth M. Streicher, Frederik De Keersmaeker, Leen Rigouts, Pieter-Jan Ceyssens, An Van den Bossche

Get full text

ENaC is a host susceptibility factor to bacterial infections in cystic fibrosis context by Hamadoun Touré, Nicolas Durand, Mickael Orgeur, Lee Ann Galindo, Fabienne Girard-Misguich, Isabelle Guénal, Jean-Louis Herrmann, Sébastien Szuplewski

Get full text

The potassium transporter KdpA affects persister formation by regulating ATP levels in Mycobacterium marinum by Xiaofan Liu, Chuan Wang, Bo Yan, Liangdong Lyu, Howard E. Takiff, Qian Gao

Get full text

Interpreting roles of mutations associated with the emergence of S. aureus USA300 strains using transcriptional regulatory network reconstruction by Saugat Poudel, Jason Hyun, Ying Hefner, Jon Monk, Victor Nizet, Bernhard O Palsson

Get full text

A genome-wide base-editing screen uncovers a pivotal role of paxillin δ ubiquitination in influenza virus infection by Jiamei Guo, Zhuo Zhou, Ruining Li, Zhifang Xing, Lei Zhang, Shiyi Zhao, Wensheng Wei, Jianwei Wang, Tao Deng

Get full text

Integrative single-cell and metagenomic analysis dissects SARS-CoV-2 shedding modes in human respiratory tract by Xiangxing Jin, Lili Ren, Xianwen Ren, Jianwei Wang

Get full text

Identification and characterization of a novel human adenovirus type HAdV-D116 by Menglan Zhou, Menglan Zhou, Wenjing Chen, Dong Zhang, Dong Zhang, Shicheng Ma, Mange Liu, Lili Ren, Jiayu Guo, Jiayu Guo, Yi Gao, Yi Gao, Minya Lu, Minya Lu, Huiting Su, Huiting Su, Ying Zhao, Ying Zhao, Yingchun Xu, Yingchun Xu, Qiwen Yang, Qiwen Yang, Qiwen Yang

Get full text

Virulence perspective genomic research unlocks the secrets of Rhizoctonia solani associated with banded sheath blight in Barnyard Millet (Echinochloa frumentacea) by T. S. S. K. Patro, K. B. Palanna, B. Jeevan, Pallavi Tatineni, T. Tharana Poonacha, Farooq Khan, G. V. Ramesh, Anusha M. Nayak, Boda Praveen, M. Divya, N. Anuradha, Y. Sandhya Rani, T. E. Nagaraja, R. Madhusudhana, C. Tara Satyavathi, S. Koti Prasanna

“…One of the significant goals of pathogenomic research is to identify genes responsible for pathogenicity in the fungus.MethodsA virulence profiling-based approach was employed and six R. solani isolates were collected from various ecological zones of India. …”
Get full text