Spatially Resolved Multiomics: Data Analysis from Monoomics to Multiomics by Changxiang Huan, Jinze Li, Yingxue Li, Shasha Zhao, Qi Yang, Zhiqi Zhang, Chuanyu Li, Shuli Li, Zhen Guo, Jia Yao, Wei Zhang, Lianqun Zhou

“…Spatial monoomics has been recognized as a powerful tool for exploring life sciences. Recently, spatial multiomics has advanced considerably, which could contribute to clarifying many biological issues. …”
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MultiomicMenu: Streamlining Multiomics Data Interpretation for Insights into Neuronal Responses to Glutamate Treatment by William Ryan, Jennifer Nguyen, Isaac Schiefer, Robert McCullumsmith

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EmptyDropsMultiome discriminates real cells from background in single-cell multiomics assays by Stathis Megas, Valentina Lorenzi, John C. Marioni

Subjects: “…Multiomics…”
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MULTIOMICS INTEGRATION IN ANTI-TUBERCULOSIS DRUG DISCOVERY by Yaro Abubakar

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Animal Wellness: The Power of Multiomics and Integrative Strategies by Ratan Kumar Choudhary, Sunil Kumar B. V., Chandra Sekhar Mukhopadhyay, Neeraj Kashyap, Vishal Sharma, Nisha Singh, Sina Salajegheh Tazerji, Roozbeh Kalantari, Pouneh Hajipour, Yashpal Singh Malik

“…In this review, we discuss the details of multiomics concerning the health and well-being of livestock animals.…”
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Network-based analyses of multiomics data in biomedicine by Rachit Kumar, Joseph D. Romano, Marylyn D. Ritchie

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Multiomics Assessment of the Gut Microbiome in Rare Hyperoxaluric Conditions by Nadim Zaidan, Chan Wang, Ze Chen, John C. Lieske, Dawn Milliner, Barbara Seide, Melody Ho, Huilin Li, Kelly V. Ruggles, Frank Modersitzki, David S. Goldfarb, Martin Blaser, Lama Nazzal

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Editorial: Multiomics approaches for understanding autism spectrum disorder by Jernej Kovac, Branko Aleksic, Danijela Krgovic, Danijela Krgovic

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The role of multiomics in revealing the mechanism of skin repair and regeneration by Shaoyan Shi, Xuehai Ou, Jafeng Long, Xiqin Lu, Siqi Xu, Gang Li

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Exploration of Biomarkers of Psoriasis through Combined Multiomics Analysis by Lu Xing, Tao Wu, Li Yu, Nian Zhou, Zhao Zhang, Yunjing Pu, Jinnan Wu, Hong Shu

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Multiomics-based analysis of the mechanism of ammonia reduction in Sphingomonas by Wang Mingcheng, Wang Mingcheng, Wang Mingcheng, Wang Mingcheng, Liu Daoqi, Xia Huili, Wang Gailing, Liu Chaoying, Guo Yanan, Guo Aizhen, Guo Aizhen, Guo Aizhen

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Interpretable and integrative analysis of single-cell multiomics with scMKL by Samuel D. Kupp, Ian A. VanGordon, Mehmet Gönen, Sadık Esener, Sebnem Ece Eksi, Çiğdem Ak

“…In this manuscript, we introduce an innovative method for single-cell analysis using Multiple Kernel Learning (scMKL), that merges the predictive capabilities of complex models with the interpretability of linear approaches, aimed at providing actionable insights from single-cell multiomics data. scMKL excels at classifying healthy and cancerous cell populations across multiple cancer types, utilizing data from single-cell RNA sequencing, ATAC sequencing, and 10x Multiome. …”
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Deconvolution of cell types and states in spatial multiomics utilizing TACIT by Khoa L. A. Huynh, Katarzyna M. Tyc, Bruno F. Matuck, Quinn T. Easter, Aditya Pratapa, Nikhil V. Kumar, Paola Pérez, Rachel J. Kulchar, Thomas J. F. Pranzatelli, Deiziane de Souza, Theresa M. Weaver, Xufeng Qu, Luiz Alberto Valente Soares Junior, Marisa Dolhnokoff, David E. Kleiner, Stephen M. Hewitt, Luiz Fernando Ferraz da Silva, Vanderson Geraldo Rocha, Blake M. Warner, Kevin M. Byrd, Jinze Liu

“…TACIT uses unbiased thresholding to distinguish positive cells from background, focusing on relevant markers to identify ambiguous cells in multiomic assays. Using five datasets (5,000,000 cells; 51 cell types) from three niches (brain, intestine, gland), TACIT outperforms existing unsupervised methods in accuracy and scalability. …”
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Multiomics genetic insights into potential molecular targets for intracranial aneurysm by Shuo Wang, Xiaolin Chen, Yi Yang, Yitong Jia, Runting Li, Fa Lin

“…Background This study aimed to identify multiomics therapeutic targets for aneurysmal subarachnoid haemorrhage (aSAH) and unruptured intracranial aneurysm (uIA) using Mendelian randomisation (MR), summary-data-based MR (SMR) and postanalysis methods.Methods Significant genetic variables were extracted from multiple databases, including Expression Quantitative Trait Loci (eQTL) from eQTLGen and Genotype-Tissue Expression V.8, protein QTL from eight plasma studies and methylation QTL from the 2018 genome-wide methylation study. …”
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Unleashing the Power of Multiomics: Unraveling the Molecular Landscape of Peripheral Neuropathy by Julie Choi, Zitian Tang, Wendy Dong, Jenna Ulibarri, Elvisa Mehinovic, Simone Thomas, Ahmet Höke, Sheng Chih Jin

“…Furthermore, we discuss the clinical implications of genomic and multiomic integration, highlighting their potential to enhance diagnostic accuracy, prognostic assessment, and personalized treatment strategies for PN. …”
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Multiomics insights into BMI-related intratumoral microbiota in gastric cancer by Kang Liu, Zhengchen Jiang, Zhengchen Jiang, Yubo Ma, Ruihong Xia, Yingsong Zheng, Kailai Yin, Chuhong Pang, Li Yuan, Li Yuan, Xiangdong Cheng, Xiangdong Cheng, Zhuo Liu, Bo Zhang, Shi Wang

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Multiomics of yaks reveals significant contribution of microbiome into host metabolism by Shuli Yang, Jieyi Zheng, Huaming Mao, Paramintra Vinitchaikul, Dongwang Wu, Jianmin Chai

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Integrated multiomics signatures to optimize the accurate diagnosis of lung cancer by Mengmeng Zhao, Gang Xue, Bingxi He, Jiajun Deng, Tingting Wang, Yifan Zhong, Shenghui Li, Yang Wang, Yiming He, Tao Chen, Jun Zhang, Ziyue Yan, Xinlei Hu, Liuning Guo, Wendong Qu, Yongxiang Song, Minglei Yang, Guofang Zhao, Bentong Yu, Minjie Ma, Lunxu Liu, Xiwen Sun, Yunlang She, Dan Xie, Deping Zhao, Chang Chen

“…In this multi-institutional study involving 2032 participants with IPLs, we integrate the clinical, radiomic with circulating cell-free DNA fragmentomic features in 5-methylcytosine (5mC)-enriched regions to establish a multiomics model (clinic-RadmC) for predicting the malignancy risk of IPLs. …”
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Multiomics biomarkers were not superior to clinical variables for pan-cancer screening by Martin Smelik, Yelin Zhao, Dina Mansour Aly, AKM Firoj Mahmud, Oleg Sysoev, Xinxiu Li, Mikael Benson

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The multiomics landscape of plasma exosomes in first-episode drug-naïve of schizophrenia by Yeqing Dong, Shuo Wang, Meijuan Li, Qiao Su, Fuyou Bi, Xiaoxiao Sun, Yuying Qiu, Jie Li

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