Linking The Cancer Imaging Archive and GenBank to the National Clinical Cohort Collaborative by Ahmad Baghal, Joel Saltz, Tahsin Kurc, Prateek Prasanna, Samantha Baghal, Janos Hajagos, Erich Bremer, Shaymaa Al‐Shukri, Joshua L. Kennedy, Michael Rutherford, Tracy Nolan, Kirk Smith, Christopher G. Chute, Fred Prior

Subjects: “…GenBank…”
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The first engkabang jantong (Rubroshorea macrophylla) genome survey dataNCBI GenBank by Hung Hui Chung, Asmeralda Ai Leen Soh, Melinda Mei Lin Lau, Han Ming Gan, Siong Fong Sim, Leonard Whye Kit Lim

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日本血吸虫(大陆株)成虫基因表达谱的研究 by 吴忠道, 余新炳, 徐　劲, 李　焱, 李晖婷, 周俊梅, 包俊英, 卞国武, 郑亦男, 邵　筱, 彭寨玉

“…报告作者1998 年至2000 年有关日本血吸虫(大陆株)成虫基因表达谱研究的结果, 主要包括:已测定551 条 EST , 其中519 条EST 已送入国际基因数据库(GenBank/ dbEST), 并获得了GenBank 的登录号。经同源整合后, 519 条EST 序列归类为388 个基因序列, 其中, 24 条(6.19%)为日本血吸虫已知基因序列;18 条(4.64%)EST 与曼氏血吸虫已知基因序 列同源, 90 条(23.19 %)EST 与其它生物的已知基因序列同源, 同源基因包括精氨酸酶、酰胺酸酶、微纤维蛋白、肌动蛋白、细 胞色素C 氧化酶、二硫异构酶、加长因子、热激蛋白70 、Y 盒结合蛋白和抗凋亡因子等。…”
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Genotypic Profiling of Bacillus cereus Recovered from Some Retail Foods in Ogun State, Nigeria, and Their Phylogenetic Relationship by Titilayo O. Adesetan, Moses O. Efuntoye, Olubukola O. Babalola

“…The thirty sequences deposited in GenBank were given accession numbers: KX574760–KX574769, KX610811–KX610820, MT757957-MT757963, and MT772282-MT772284. …”
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Addressing widespread misidentifications of traditional medicinal mushrooms in Sanghuangporus (Basidiomycota) through ITS barcoding and designation of reference sequences by Shan Shen, Shi-Liang Liu, Ji-Hang Jiang, Li-Wei Zhou

“…In practice, species of Sanghuangporus referred to in medicinal studies and industry are now differentiated mainly by a BLAST search of GenBank with the ITS barcoding region as a query. …”
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白鹈鹕体内对盲囊线虫种类的鉴定及其ITS序列分析 by 陈绚姣 宋美冉 单 芬 陈 武 李少基 彭仕明

“…(GenBank^TM登录号:KF990496.1)ITS-1的序列相似性分别为98.9%、99.8%; ITS-2序列长度分别为288-289 bp,与<i>C.bancrofti</i>(GenBank^TM登录号:FM177887.1)的ITS-2序列的相似性分别为96%、95%; 5.8SrDNA序列长度为157 bp。…”
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Identification of a novel papillomavirus in oral swabs from giant pandas (Ailuropoda melanoleuca) by Yi Zhao, Min Zhao, Wen Zhang

“…To fully characterize papillomavirus diversity in giant pandas (Ailuropoda melanoleuca), we identified a novel papillomavirus (named AmPV5, GenBank accession number MZ357114) in oral swabs from giant pandas with the help of viral metagenomics technology in this study. …”
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Validation of Fuscoporia (Hymenochaetales, Basidiomycota) ITS sequences and five new species based on multi-marker phylogenetic and morphological analyses by Yoonhee Cho, Dohye Kim, Yoongil Lee, Juhwan Jeong, Shahid Hussain, Young Woon Lim

“…Here, the sequences available in GenBank for Fuscoporia (Hymenochaetales) were validated. …”
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Comparative Analysis of the Full-Length Genome Sequence of a Clinical Isolate of Human Parainfluenza Virus 4B by John A. Lednicky, Thomas B. Waltzek, Micah D. Halpern, Sara B. Hamilton

“…Here, we compare and contrast the genetic features of the three completely sequenced hPIV-4B genomes currently present in GenBank.…”
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Molecular Identification, Histopathology and Antibiotic Susceptibility Profiling of Aeromonas veronii Isolated from Oreochromis niloticus in Bangladesh by Sayed Mashequl Bari, Mohammad Muttakinul Islam, Aktia Amina, Marufa Khatun, A. M. Shahabuddin

“…The analysed 16S rRNA sequence (GenBank accession no. PP832815) showed a close relationship (100% identity) with A. veronii from China (GenBank accession no. …”
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Taenia asiatica: Mitochondrial signatures based analysis of an emerging public health threat in India by Aman D. Moudgil, Anil K. Nehra, Pallavi Moudgil

“…The sequences generated herein exhibited 99.60 % and 98.85 % similarity to the GenBank-archived sequences of T. asiatica corresponding to the nad1 and cox1 genes, respectively. …”
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Correction to: Proposal of a new nomenclature for introns in protein-coding genes in fungal mitogenomes by Shu Zhang, Yong-Jie Zhang

“…All sequences in the file should be that of NC_036382 (GenBank accession number), but have been erroneously pasted as the nad4L sequence of NC_001715.…”
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我国蜥蜴科动物线粒体基因组全序列的研究现状 by 马微微 刘 欢 赵文阁 刘 鹏

“…线粒体基因组全序列的研究是近年来分子生物学研究的重要课题之一。本文对目前GenBank上公布的中国9种蜥蜴科动物线粒体基因组全序列的长度及组成进行分析,建立系统发育树,探讨蜥蜴科物种的起源、演化和亲缘关系。…”
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Nucleotide Sequencing and Identification of Some Wild Mushrooms by Sudip Kumar Das, Aninda Mandal, Animesh K. Datta, Sudha Gupta, Rita Paul, Aditi Saha, Sonali Sengupta, Priyanka Kumari Dubey

“…The aligned sequences revealed identity (homology percentage from GenBank data base) of Amanita hemibapha [CN (Chota Nagpur) 1, % identity 99 (JX844716.1)], Amanita sp. …”
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Alternaria radicina; unveiling the cause, spread, and molecular basis of a novel coriander leaf blight disease in Egypt by Khalid M. Ghoneem, Ehsan M. Rashad, Abdulaziz A. Al-Askar, Yosra A. Helmy, Seham M.A. El-Gamal, Shafik D. Ibrahim, WesamEldin I.A. Saber

“…Through comprehensive morphological characteristics, and molecular identification (GenBank OL823169), the pathogen was conclusively identified as Alternaria radicina. …”
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Genetic analysis of nucleotide sequences of neuraminidase gene of highly pathogenic avian influenza A/H5N8 virus isolates recovered in the Russian Federation in 2020 by P. B. Akshalova, N. G. Zinyakov, A. V. Andriyasov, P. D. Zhestkov, Z. B. Nikonova, S. N. Kolosov, I. A. Chvala

“…The paper also provides data of a comparative analysis of nucleotide sequences of the studied isolates and the isolates from the international GenBank and GISAID databases, recovered in other countries from 2007 to 2020. …”
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通用引物鉴定野鸟源禽流感病毒HA亚型 by 张苗, 柴洪亮, 杨思远, 侯志军, 邢明伟, 孙颖, 华育平

“…即利用1对通用引物对所有病毒样品进行RT-PCR扩增,将各PCR产物进行核苷酸序列测定并与GenBank上参考毒株序列进行同源性比较,以确定其HA亚型。BLAST分析显示,22株已知亚型毒株的PCR扩增产物的序列测定结果与GenBank公布的相应亚型毒株序列比较其核苷酸序列同源性均在99%～87%之间,而6株未知亚型的野鸟流感病毒毒株测得的核苷酸序列经BLAST比对分别确立为1株H4、1株H5、2株H7、2株H11亚型。…”
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Prevalence and Molecular Characterization of Cysticercus tenuicollis Isolated from Some Intermediate Host in Kurdistan-Iraq by Abdullah Ahmed Hama, Rostam Hama Zorab, Fatima Mohammed Ali, Awaz M. Salih, Amer Abdullah Hassan

“…The selected cysts were preserved in 70% Ethanol for DNA extraction and molecular study,  The mt-CO1 gene was amplified with a conventional polymerase chain reaction (PCR), the PCR product purified and DNA sequencing for reverse and forward strands was determined by a genetic analyzer, the obtained sequences aligned with the DNA sequences of T. hydatigena in Iran, Turkey and Palestine, which deposited in GenBank under the following accession number (JQ710588), (JN827307) and ( KM032284) respectively. …”
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Mitochondrial Phylogeny and Systematics of Palearctic Eagles by Ivan J. Starikov, Michael Wink

“…This study examined the available mitochondrial DNA sequences from GenBank and BOLD databases, also unpublished sequences obtained by the authors were added.…”
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Decoding the anomalies: a genome-based analysis of Bacillus cereus group strains closely related to Bacillus anthracis by Thuto Gomolemo Magome, Marius Surleac, Marius Surleac, Ayesha Hassim, Cornelius Carlos Bezuidenhout, Henriette van Heerden, Kgaugelo Edward Lekota

“…We recommend isolates with ANI ≥99% to standard reference B. anthracis be designated as typical B. anthracis in GenBank to maintain taxonomic clarity and precision.…”
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