Hormone Receptors in Cervicovaginal Cells by Şayeste Demirezen, Funda Gerçeker, Sinan Beksaç

“…Afterwards, hormone-bound receptor dimerizes with another receptor and then the dimer binds to specific DNA sequence through the DBD. Consequently, hormones regulate gene transcription via a direct interaction with DNA. …”
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Effects of elongation delay in transcription dynamics by Xuan Zhang, Huiqin Jin, Zhuoqin Yang, Jinzhi Lei

“…In the transcription process, elongation delay is induced by the movement of RNA polymerases (RNAP) along the DNA sequence, and can result in changes in the transcription dynamics. …”
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An Artificial Intelligence Approach for Verifying Persons by Employing the Deoxyribonucleic Acid (DNA) Nucleotides by Raid Rafi Omar Al-Nima, Marwa Mawfaq Mohamedsheet Al-Hatab, Maysaloon Abed Qasim

“…The ADAR has been designed and applied to multiple datasets, namely, the DNA classification (DC), sample DNA sequence (SDS), human DNA sequences (HDS), and DNA sequences (DS). …”
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Transcriptional Regulation of the rsbV Promoter Controlling Stress Responses to Ethanol, Carbon Limitation, and Phosphorous Limitation in Bacillus subtilis by Soo-Keun Choi, Milton H. Saier

“…The integrity of the DNA sequence is important for all three responses.…”
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Evaluation of the genome in bird breeding by A. F. Yakovlev, N. V. Dement’eva

“…New technologies determining the DNA sequence of nucleotides have led to the discovery of hundreds of thousands of mononucleotide polymorphic markers, some of which are associated with breeding quality of animals. …”
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General encoding of canonical k-mers by Wittler, Roland

“…., when the reading direction of a DNA-sequence is ambiguous, canonical k-mers are considered, i.e., the lexicographically smaller of a given k-mer and its reverse (or reverse complement) is chosen as a representative. …”
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Genome Architecture and Its Roles in Human Copy Number Variation by Lu Chen, Weichen Zhou, Ling Zhang, Feng Zhang

“…Our review highlights that genome architecture, from DNA sequence to high-order genomic organization, is an important molecular factor in CNV mutagenesis and human genomic instability.…”
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Why morphology matters: the negative consequences of hasty descriptions of putative novelties in asexual ascomycetes by Ondřej Koukol, Gregorio Delgado

“…Descriptions of new fungal species have been almost routinely based on phenotypic studies coupled with single or multigene phylogenetic analyses of DNA sequence data. However, high accessibility of sequencing services together with an increasing amount of available molecular data are providing easier and less critical support for taxonomic novelties without carefully studying the phenotype, particularly morphology. …”
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First records of Oxychilus alliarius and O. cellarius (Gastropoda, Stylommatophora, Oxychilidae) in Mexico: mtDNA identification and potential distributions by Ali Gabrielle Trujillo-Díaz, Victoria Araiza-Gómez, Jazmín García-Román, José Luis Hernández-Domínguez, Gerardo Zúñiga, Edna Naranjo-García

“…These three introduced land snail species were identified by combining their genital anatomy and mitochondrial COI DNA sequence data. A two-dimensional geometric morphometric analysis of shell shape variation based on both apertural and apical views showed that there were no significant conchological differences between the three species except, to some degree, size. …”
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New tribe-level classification of Hypostominae (Loricariidae) based on optimization of morphological states on DNA-based relationships, with descriptions of three new tribes and tw... by Jonathan W. Armbruster, Nathan K. Lujan

“…We re-optimized morphological character-state change by mapping states previously used to infer evolutionary history onto a composite phylogenetic tree inferred from DNA-sequence data. This revealed the strong influence on morphology-based phylogenies of a correlated suite of opercular character states related to the mechanism for cheek odontode eversion. …”
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Linking Epigenetics to Human Disease and Rett Syndrome: The Emerging Novel and Challenging Concepts in MeCP2 Research by Robby Mathew Zachariah, Mojgan Rastegar

“…Epigenetics refer to inheritable changes beyond DNA sequence that control cell identity and morphology. …”
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Nanocomposite of electrochemically reduced graphene oxide and gold nanourchins for electrochemical DNA detection by Mostafa Azimzadeh, Zahra Aghili, Behrooz Jannat, Saeid Jafari, Saeed Rafizadeh Tafti, Navid Nasirizadeh

“…A specific single‐stranded DNA probe was designed based on the target DNA sequence and was thiolated to be self‐assembled on the surface of the gold nanourchins placed on the modified electrode. …”
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Ensemble learning-based predictor for driver synonymous mutation with sequence representation. by Chuanmei Bi, Yong Shi, Junfeng Xia, Zhen Liang, Zhiqiang Wu, Kai Xu, Na Cheng

“…Interestingly, while deep learning methods have shown promise in other fields, their DNA sequence representations do not significantly enhance the identification of driver synonymous mutations in this study. …”
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Application of internal transcribed spacer (ITS) sequences for identifying Anoectochilus setaceus Blume in Thanh Hoa, Vietnam by B. B. Thinh, L. D. Chac, L. T.M. Thu

“…Basically, this technique is based on the use of a DNA sequence (about 400–800 bp) as a standard to identify and determine the species relation of organisms quickly and accurately. …”
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Dynamic Circuit Specialisation for Key-Based Encryption Algorithms and DNA Alignment by Tom Davidson, Fatma Abouelella, Karel Bruneel, Dirk Stroobandt

“…Our final design is up to 2.80-times more efficient on cheaper FPGAs than the original DNA aligner when at least one DNA sequence is longer than 758 characters. Most sequences in DNA alignment are of the order 213.…”
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A new crustin-like gene from the redclaw crayfish Cherax quadricarinatus and its response to decapod iridescent virus 1 (DIV1) challenge by Xiaoying Hang, Jianbo Zheng, Fei Li

“…In this study, a novel crustin-like gene, Cqcarc1, was characterized from the redclaw crayfish Cherax quadricarinatus. The full-length cDNA sequence was 488 bp, and the open reading frame encoded 101 amino acids with a signal peptide in the N-terminus and a conserved WAP domain in the C-terminus. …”
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Immobilized Native Bacteria as a Tool for Bioremediation of Soils and Waters: Implementation and Modeling by C. Lobo, M. Sanchez, C. Garbi, E. Ferrer, M.J. Martinez-Iñigo, J.L. Allende, C. Martinez, L. Casasas, R. Alonso, A. Gibello, M. Martin

“…Based on 3,4-dihydroxyphenylacetate (3,4-DHPA) dioxygenase amino acid sequence and DNA sequence data for homologous genes, two different oligonucleotides were designed. …”
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Bioprospecting for Isoetes cangae Endophytes with Potential to Promote Plant Growth by Danielle Silveira Santos, Paula Veronesi Marinho Pontes, Analy Machado de Oliveira Leite, Aline Lemos Ferreira, Mariana de Souza, Thainá dos Santos Silva Araujo, Henrique Fragoso dos Santos, Guilherme Correa de Oliveira, José Augusto Bitencourt, Allysson Buraslan Cavalcanti, Rodrigo Lemes Martins, Francisco De Assis Esteves

“…The bioprospecting of potentially growth-promoting endophytes required the following steps to be taken: isolation of endophytic colonies, molecular identification by 16S rDNA sequence analysis, and evaluation of the bacterial potential for nitrogen fixation, production of indole acetic acid and siderophores, as well as phosphate solubilization and mineralization. …”
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Remodeling Intestinal Flora with Sleeve Gastrectomy in Diabetic Rats by Xiaofei Huang, Pan Weng, Huixin Zhang, Yingli Lu

“…The composition changes of intestinal flora were detected by 16S rDNA sequence analysis. Results. In diabetic rats, weight and fasting blood glucose decreased significantly after sleeve gastrectomy. …”
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Modern approaches to artificial gene synthesis: aspects of oligonucleotide synthesis, enzymatic assembly, sequence verification and error correction by G. Y. Shevelev, D. V. Pyshnyi

“…Thus, significant reduction in cost of DNA sequencing has provided an easy access to large amounts of data on the genetic sequences of various organisms, and decreased the price of the DNA sequence synthesis, which, analogous to Moore’s law, resulted in an opportunity to create a lot of potential genes without the time – consuming and labor – intensive traditional methods of molecular biology. …”
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