beDNA : un projet visant à la collection systématique d’échantillons humains archéologiques à vocation paléogénétique – une première expérimentation by Pauline Ehrhardt, Philippe Chambon, Eric Gimel, Evelyne Heyer, Sophie Lafosse, Pascal Sellier, Aline Thomas, Céline Bon

Subjects: “…ancient DNA…”
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Colibactin-induced damage in bacteria is cell contact independent by Emily Lowry, Amir Mitchell

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Polymorphism of monogenic scab resistance loci in apple varieties by A. S. Lyzhin, N. N. Savel’eva

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Walking in the footsteps of the forefathers. The concept of “ancestry” between political use of molecular biology and indigenous territory, understood as a relationship between the... by Laura Volpi

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Sufetula culshawi sp. nov. (Lepidoptera, Crambidae, Lathrotelinae): a previously unrecognised species affecting cultivated palms by Mark R. Young, Peter R. Hall, Nigel G.J. Richards, David C. Lees

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Bidirectional effects of neutrophils on Streptococcus oralis biofilms in vitro by Basmah M. Almaarik, Rizwan Ali, Paul R. Cooper, Michael R. Milward, Josefine Hirschfeld

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Real-time analysis of initiation regulation systems during the progression of the reconstituted chromosomal replication cycle by Koki Kanoh, Masayuki Su’etsugu

Subjects: “…DNA amplification…”
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Diet-microbiome covariation across three giraffe species in a close-contact zone by Elin Videvall, Brian A. Gill, Michael B. Brown, Hannah K. Hoff, Bethan L. Littleford-Colquhoun, Peter Lokeny, Paul M. Musili, Tyler R. Kartzinel

Subjects: “…DNA metabarcoding…”
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基于线粒体DNA Cyt b研究城市化对上海金线侧褶蛙遗传结构的影响 by 张伟 谢汉宾 杨刚 王军馥 李必成 王天厚 王小明

“…本研究对上海市的金线侧褶蛙（Pelophylax plancyi）的mtDNA Cyt b 部分序列进行分析，共扩增出235条序列，获得61个单倍型。研究表明城市区域遗传多样性较低，上海市的金线侧褶蛙分化程度处于中低的水平（Max FST=0296；Min FST=0004），各种群之间遗传分化有限。…”
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Performance evaluation of nine reference centers and comparison of DNA extraction protocols for effective surveillance of Leishmania-infected Phlebotomine sand flies: Basis for technical recommendations. by Jorian Prudhomme, Aymeric Delabarre, Bulent Alten, Umut Berberoglu, Eduardo Berriatua, Gioia Bongiorno, José Manuel Cristovao, Maya Davidovich-Cohen, Trentina Di Muccio, Ozge Erisoz Kasap, Eleonora Fiorentino, Oscar D Kirstein, Edwin Kniha, Carla Maia, Mesut Mungan, Clara Muñoz-Hernández, Muhammed Nalçaci, Gizem Oguz Kaskan, Yusuf Ozbel, Seray Ozensoy Toz, Ricardo Parreira, Katharina Platzgummer, Ceylan Polat, José Risueño, Liora Studentsky, Gamze Varol, Julia Walochnik, Kardelen Yetişmiş, Florence Robert-Gangneux

“…However, the absence of standardized technical recommendations for Leishmania DNA detection hinders effective surveillance. This study aimed to compare different DNA extraction protocols and conduct a qPCR-based External Quality Assessment (EQA) through a multicenter study involving nine reference laboratories, with a focus on optimizing Leishmania DNA detection in sand fly.…”
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HBV DNA integration and somatic mutations in HCC patients with HBV-HCV dual infection reveals profiles intermediate between HBV- and HCV-related HCC by Chiao-Ling Li, Chia-Lang Hsu, You-Yu Lin, Ming-Chih Ho, Rey-Heng Hu, Sheng-Tai Tzeng, Ya-Chun Wang, Yasuhito Tanaka, Pei-Jer Chen, Shiou-Hwei Yeh

“…Methods We examined HBV’s involvement in 93 HBCV-HCC cases by analyzing HBV DNA integration as an indicator of HCC originating from HBV-infected hepatocytes, compared with 164 HBV-HCCs and 56 HCV-HCCs as controls. …”
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Insights from DNA Barcodes-Based Phylogenetic Analysis of Medicinal Plants and Estimation of Their Conservation Status: A Case Study in the Tianshan Wild Forest, China by Aerguli Jiamahate, Tohir A. Bozorov, Jiancheng Wang, Jianwei Zhang, Hongxiang Zhang, Xiyong Wang, Honglan Yang, Daoyuan Zhang

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Exploring the Effects of <i>Gracilaria lemaneiformis</i> Polysaccharides on the Fecal Microbiota and Fecal Metabolites of Fattening Pigs Based on 16S rDNA and Metabolome Sequencing by Mingyang Jia, Qiang Ma, Hongjun Wang, Xiangzhou Yan, Lei Wang, Baosong Xing, Qingxia Lu, Jing Wang

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Inflammatory Bowel Diseases: When Natural Friends Turn into Enemies—The Importance of CpG Motifs of Bacterial DNA in Intestinal Homeostasis and Chronic Intestinal Inflammation by Florian Obermeier, Claudia Hofmann, Werner Falk

“…Bacterial DNA has been shown to be protective against experimental colitis. …”
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A comparative template-switching cDNA approach for HTS-based multiplex detection of three viruses and one viroid commonly found in apple trees by Francisco Mosquera-Yuqui, Daniel Ramos-Lopez, Xiaojun Hu, Yu Yang, Joshua L. Mendoza, Emmanuel Asare, Joshua Habiger, Oscar P. Hurtado-Gonzales, Andres S. Espindola

“…Following a template-switching cDNA amplification protocol, seven cDNA synthesis treatments were used to test simultaneously the relative abundance and coverage of the three most commonly latent RNA viruses found in apples: apple chlorotic leaf spot virus, apple stem grooving virus, and apple stem pitting virus, as well as the viroid apple hammerhead viroid. …”
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Immunogenicity and safety of a COVID-19 DNA vaccine in healthy adults and elderly: A randomized, observer-blind, placebo-controlled phase 2 trial by Siyue Jia, Chengwei Shao, Xin Cheng, Hongxing Pan, Zhijian Wang, Yu Xia, Jianfang Xu, Xuefen Huai, Danjing Leng, Jiarong Wang, Gan Zhao, Bin Wang, Jingxin Li, Fengcai Zhu

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DNA-based cell typing in menstrual effluent identifies cell type variation by sample collection method: toward noninvasive biomarker development for women’s health by Irma M. Vlasac, Hannah G. Stolrow, Zaneta M. Thayer, Brock C. Christensen, Luisa Rivera

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The type of diet consumed during prepuberty modulates plasma cholesterol, hepatic LXRα expression, and DNA methylation and hydroxymethylation during adulthood in male rats. by Ana Aguilar-Lozano, Berenice Palacios-González, Martha Guevara-Cruz, Armando R Tovar, Alam Palma-Guzman, Lilia G Noriega

“…Conversely, a prepubertal HFD decreased adult metabolic flexibility, increased serum cholesterol, and decreased Lxrα expression and global DNA hydroxymethylation, while also increasing DNA methylation levels despite a chronic CD. …”
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Relationship between oxidative stress biomarkers and micronuclei scoring as a biomarker for DNA damage in Egyptian nicotine-dependent smokers: A cross-sectional study by Asmaa Mahmoud Mohammed, Dalia Farouk, Adel F. Hashish

“…Background/aim About one-fifth of cancer deaths are caused by tobacco smoking. Nicotine-related DNA damage is thought to be the result of oxidative stress, whereas DNA damage can be represented in the form of binucleated micronuclei (BMNi). …”
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Extended HPV genotyping by the BD Onclarity assay: concordance with screening HPV-DNA assays, triage biomarkers, and histopathology in women from the NTCC2 study by Laura De Marco, Simonetta Bisanzi, Guglielmo Ronco, Pamela Mancuso, Francesca Carozzi, Elena Allia, Raffaella Rizzolo, Daniela Gustinucci, Helena Frayle, Jessica Viti, Anna Iossa, Elena Cesarini, Simonetta Bulletti, Basilio Passamonti, Silvia Gori, Laura Toniolo, Francesco Venturelli, Annarosa Del Mistro, Paolo Giorgi Rossi, Maria Benevolo

“…The concordance between BD and HPV-DNA screening test was 87% for Cobas (1,250/1,436) and 65.9% for HC2 (1,115/1,693). …”
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