Biotechnological tools boost the functional diversity of DNA-based data storage systems by Xiaoyuan Xu, Wen Wang, Zhi Ping

Subjects: “…DNA data storage…”
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Metagenomic analysis of DNA viruses from posttransplant lymphoproliferative disorders by Vikas R. Dharnidharka, Marianna B. Ruzinova, Chun‐Cheng Chen, Priyanka Parameswaran, Harry O'Gorman, Charles W. Goss, Hongjie Gu, Gregory A. Storch, Kristine Wylie

“…Most clinical/epidemiological/tumor characteristics do not consistently associate with worse patient survival, so our aim was to identify if other viral genomic characteristics associated better with survival. We extracted DNA from stored paraffin‐embedded PTLD tissues at our center, identified viral sequences by metagenomic shotgun sequencing (MSS), and analyzed the data in relation to clinical outcomes. …”
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Robust ensemble of handcrafted and learned approaches for DNA-binding proteins by Loris Nanni, Sheryl Brahnam

“…Purpose – Automatic DNA-binding protein (DNA-BP) classification is now an essential proteomic technology. …”
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Prognostic Impact of DNA-Image-Cytometry in Neuroendocrine (Carcinoid) Tumours by H. Raatz, A. Böcking, S. Hauptmann

“…Moreover, parameters determined by diagnostic DNA cytometry like the 5c‐exceeding rate, the 2c‐deviation index, DNA‐grade of malignancy, DNA‐entropy and the type of DNA histogram were found to be of prognostic relevance. …”
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Blood-based DNA methylation markers for lung cancer prediction by Marc Chadeau-Hyam, Paolo Vineis, Caroline Relton, Mattias Johansson, Gianluca Severi, Roger L Milne, Melissa C Southey, Pierre-Antoine Dugué, Florence Guida, Mikael Johansson, Torkjel Sandanger, Justina Ucheojor Onwuka, Ryan Langdon, Therese Haugdahl Nøst, Hilary A. Robbins, Matthew Suderman

“…We evaluated if blood-based DNA methylation markers can improve a traditional lung cancer prediction model.Methods and analysis This study used four prospective cohorts with blood samples collected prior to lung cancer diagnosis. …”
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DNA Damage and Base Excision Repair in Mitochondria and Their Role in Aging by Ricardo Gredilla

“…Due to the proximity of mitochondrial DNA to the main sites of mitochondrial-free radical generation, oxidative stress is a major source of mitochondrial DNA mutations. …”
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Cryptanalysis of an Image Encryption Algorithm Using DNA Coding and Chaos by Yuzhuo Zhao, Qiqin Shi, Qun Ding

“…We broke an image encryption scheme using chaos and DNA encoding. Through our comprehensive security analysis, we found a security vulnerability in the mechanism of the association between the key and plaintext and proposed a breaking scheme. …”
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DNA Methylation: Its Role and Interaction with Epigenetic Modifications in Cancer by Nasreddine El Omari, Saad Bakrim, Mohamed Bakha, Abdelaali Balahbib, Abdelhakim Bouyahya, Chrismawan Ardianto, Long Chiau Ming, Hooi Leng Ser

“… DNA methylation is an epigenetic mark involving the addition of a methyl group to DNA, particularly at cytosine residues. …”
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Peptidoglycan and Bacterial DNA Induce Inflammation and Coagulation Markers in Synergy by Marie-Claude Amoureux, Nandani Rajapakse, Lazlo Stipkovits, Susan Szathmary

“…Nevertheless, the existence of a synergistic relationship between peptidoglycan and bacterial DNA on these two physiological responses has not been investigated. …”
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Advance technologies for DNA-protein interactions and future research prospect by Chengyi Qu, Hao Du

Subjects: “…DNA-protein interaction…”
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Liberties of the genome: insertions of mitochondrial DNA fragments into nuclear genome by M. V. Golubenko, V. P. Puzyrev

Subjects: “…mitochondrial dna…”
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Kloramfenikol Aptameri Fonksiyonlandırılmış DNA Hidrojellerinin Sentez Koşullarının Optimizasyonu by Gülnur Camızcı Aran, Ceren Bayraç

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Conjugates of Phthalocyanines With Oligonucleotides as Reagents for Sensitized or Catalytic DNA Modification

“…<p>Several conjugates of metallophthalocyanines with deoxyribooligonucleotides were synthesized to investigate sequence-specific modification of DNA by them. Oligonucleotide parts of these conjugates were responsible for the recognition of selected complementary sequences on the DNA target. …”
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Herpes Simplex Virus Latency: The DNA Repair-Centered Pathway by Jay C. Brown

“…Here I describe the basic features of the DNA repair-centered pathway and discuss some of the experimental evidence supporting it. …”
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Synthetic transmembrane DNA receptors enable engineered sensing and actuation by Ze-Rui Zhou, Man-Sha Wu, Zhenglin Yang, Yuting Wu, Weijie Guo, Da-Wei Li, Ruo-Can Qian, Yi Lu

“…Here we show that the dimerization of synthetic transmembrane DNA receptors executes a systematically engineered sensing and actuation cascade in response to external molecular signals. …”
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Immunogenicity of RSV F DNA Vaccine in BALB/c Mice by Erdal Eroglu, Ankur Singh, Swapnil Bawage, Pooja M. Tiwari, Komal Vig, Shreekumar R. Pillai, Vida A. Dennis, Shree R. Singh

“…With a focus on Th1 immunity, we developed a DNA vaccine containing the native RSV fusion (RSV F) protein and studied its immune response in BALB/c mice. …”
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From DNA Radiation Damage to Cell Death: Theoretical Approaches by Francesca Ballarini

“…Basing on these results, a reinterpretation of the TDRA was also proposed, identifying the TDRA “sublesions” and “lesions” as clustered DNA double-strand breaks and (lethal) chromosome aberrations, respectively.…”
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Application of DNA markers in molecular breeding and genetic studies of grapevine by E. T. Ilnitskaya, M. V. Makarkina

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Topical Mitomycin C and Radiation Induce Conjunctival DNA-Polyploidy by Olaf Cartsburg, Christopher Kallen, Jost Hillenkamp, Rainer Sundmacher, Natalia Pomjanski, Alfred Böcking

“…Our aim was to investigate changes in the nuclear DNA‐distribution of conjunctival epithelial cells after MMC‐ and radiation therapy by DNA‐image‐cytometry. …”
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Endometrial Cancer and Hypermethylation: Regulation of DNA and MicroRNA by Epigenetics by Kouji Banno, Iori Kisu, Megumi Yanokura, Kenta Masuda, Yusuke Kobayashi, Arisa Ueki, Kosuke Tsuji, Wataru Yamagami, Hiroyuki Nomura, Nobuyuki Susumu, Daisuke Aoki

“…Therefore, in recent years, epigenetic mechanisms that do not involve changes in DNA sequences have been examined. Studies aimed at detection of aberrant DNA hypermethylation in cancer cells present in microscopic amounts in vivo and application of the results to cancer diagnosis have also started. …”
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