Using genomic data and machine learning to predict antibiotic resistance: A tutorial paper. by Faye Orcales, Lucy Moctezuma Tan, Meris Johnson-Hagler, John Matthew Suntay, Jameel Ali, Kristiene Recto, Phelan Glenn, Pleuni Pennings

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Specificity and tunability of efflux pumps: A new role for the proton gradient? by Matthew Gerry, Duncan Kirby, Boian S Alexandrov, Dvira Segal, Anton Zilman

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A Structural Model of Truncated Gaussia princeps Luciferase Elucidating the Crucial Catalytic Function of No.76 Arginine towards Coelenterazine Oxidation. by Nan Wu, Zhi-Chao Xu, Kai-Dong Du, Shen Huang, Naohiro Kobayashi, Yutaka Kuroda, Yan-Hong Bai

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Biophysical modeling and experimental analysis of the dynamics of C. elegans body-wall muscle cells. by Xuexing Du, Jennifer Crodelle, Victor James Barranca, Songting Li, Yunzhu Shi, Shangbang Gao, Douglas Zhou

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Integrative analysis of ATAC-seq and RNA-seq for cells infected by human T-cell leukemia virus type 1. by Azusa Tanaka, Yasuhiro Ishitsuka, Hiroki Ohta, Norihiro Takenouchi, Masanori Nakagawa, Ki-Ryang Koh, Chiho Onishi, Hiromitsu Tanaka, Akihiro Fujimoto, Jun-Ichirou Yasunaga, Masao Matsuoka

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Estimating the distribution of parameters in differential equations with repeated cross-sectional data. by Hyeontae Jo, Sung Woong Cho, Hyung Ju Hwang

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scaDA: A novel statistical method for differential analysis of single-cell chromatin accessibility sequencing data. by Fengdi Zhao, Xin Ma, Bing Yao, Qing Lu, Li Chen

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Estimating the time-varying effective reproduction number via Cycle Threshold-based Transformer. by Xin-Yu Zhang, Lan-Lan Yu, Wei-Yi Wang, Gui-Quan Sun, Jian-Cheng Lv, Tao Zhou, Quan-Hui Liu

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Dialogue mechanisms between astrocytic and neuronal networks: A whole-brain modelling approach. by Obaï Bin Ka'b Ali, Alexandre Vidal, Christophe Grova, Habib Benali

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Adjudicating between face-coding models with individual-face fMRI responses. by Johan D Carlin, Nikolaus Kriegeskorte

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Ten simple rules for good model-sharing practices. by Ismael Kherroubi Garcia, Christopher Erdmann, Sandra Gesing, Michael Barton, Lauren Cadwallader, Geerten Hengeveld, Christine R Kirkpatrick, Kathryn Knight, Carsten Lemmen, Rebecca Ringuette, Qing Zhan, Melissa Harrison, Feilim Mac Gabhann, Natalie Meyers, Cailean Osborne, Charlotte Till, Paul Brenner, Matt Buys, Min Chen, Allen Lee, Jason Papin, Yuhan Rao

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Low-dimensional controllability of brain networks. by Remy Ben Messaoud, Vincent Le Du, Camile Bousfiha, Marie-Constance Corsi, Juliana Gonzalez-Astudillo, Brigitte Charlotte Kaufmann, Tristan Venot, Baptiste Couvy-Duchesne, Lara Migliaccio, Charlotte Rosso, Paolo Bartolomeo, Mario Chavez, Fabrizio De Vico Fallani

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Physiology-informed regularisation enables training of universal differential equation systems for biological applications. by Max de Rooij, Balázs Erdős, Natal A W van Riel, Shauna D O'Donovan

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ASGCL: Adaptive Sparse Mapping-based graph contrastive learning network for cancer drug response prediction. by Yunyun Dong, Yuanrong Zhang, Yuhua Qian, Yiming Zhao, Ziting Yang, Xiufang Feng

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A multivalent binding model infers antibody Fc species from systems serology. by Armaan A Abraham, Zhixin Cyrillus Tan, Priyanka Shrestha, Emily R Bozich, Aaron S Meyer

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Simulation-based validation of a method to detect changes in SARS-CoV-2 reinfection risk. by Belinda Lombard, Harry Moultrie, Juliet R C Pulliam, Cari van Schalkwyk

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Using genomic data and machine learning to predict antibiotic resistance: A tutorial paper by Faye Orcales, Lucy Moctezuma Tan, Meris Johnson-Hagler, John Matthew Suntay, Jameel Ali, Kristiene Recto, Phelan Glenn, Pleuni Pennings

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Ten simple rules to complete successfully a computational MSc thesis project. by Edoardo Saccenti, Cristina Furlan

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Marked point process variational autoencoder with applications to unsorted spiking activities. by Ryohei Shibue, Tomoharu Iwata

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Machine learning mathematical models for incidence estimation during pandemics. by Oscar Fajardo-Fontiveros, Mattia Mattei, Giulio Burgio, Clara Granell, Sergio Gómez, Alex Arenas, Marta Sales-Pardo, Roger Guimerà

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