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  1. 21
    Systematic protein–protein interaction mapping for clinically relevant human GPCRs

    Systematic protein–protein interaction mapping for clinically relevant human GPCRs by Kate Sokolina, Saranya Kittanakom, Jamie Snider, Max Kotlyar, Pascal Maurice, Jorge Gandía, Abla Benleulmi‐Chaachoua, Kenjiro Tadagaki, Atsuro Oishi, Victoria Wong, Ramy H Malty, Viktor Deineko, Hiroyuki Aoki, Shahreen Amin, Zhong Yao, Xavier Morató, David Otasek, Hiroyuki Kobayashi, Javier Menendez, Daniel Auerbach, Stephane Angers, Natasa Pržulj, Michel Bouvier, Mohan Babu, Francisco Ciruela, Ralf Jockers, Igor Jurisica, Igor Stagljar

    Published 2017-03-01
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  2. 22
    Mathematical Modeling of Biological Processes /

    Mathematical Modeling of Biological Processes / by Friedman, Avner, Kao, Chiu-Yen

    Published 2014
    Subjects: “…Mathematical and Computational Biology. https://scigraph.springernature.com/ontologies/product-market-codes/M31000 14087…”
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  3. 23
    A multimodal Transformer Network for protein-small molecule interactions enhances predictions of kinase inhibition and enzyme-substrate relationships.

    A multimodal Transformer Network for protein-small molecule interactions enhances predictions of kinase inhibition and enzyme-substrate relationships. by Alexander Kroll, Sahasra Ranjan, Martin J Lercher

    Published 2024-05-01
    “…PLoS Computational Biology…”
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  4. 24
    Tree polynomials identify a link between co-transcriptional R-loops and nascent RNA folding.

    Tree polynomials identify a link between co-transcriptional R-loops and nascent RNA folding. by Pengyu Liu, Jacob Lusk, Nataša Jonoska, Mariel Vázquez

    Published 2024-12-01
    “…PLoS Computational Biology…”
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  5. 25
    Circadian distribution of epileptiform discharges in epilepsy: Candidate mechanisms of variability.

    Circadian distribution of epileptiform discharges in epilepsy: Candidate mechanisms of variability. by Isabella Marinelli, Jamie J Walker, Udaya Seneviratne, Wendyl D'Souza, Mark J Cook, Clare Anderson, Andrew P Bagshaw, Stafford L Lightman, Wessel Woldman, John R Terry

    Published 2023-10-01
    “…PLoS Computational Biology…”
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  6. 26
    Low-dimensional controllability of brain networks

    Low-dimensional controllability of brain networks by Remy Ben Messaoud, Vincent Le Du, Camile Bousfiha, Marie-Constance Corsi, Juliana Gonzalez-Astudillo, Brigitte Charlotte Kaufmann, Tristan Venot, Baptiste Couvy-Duchesne, Lara Migliaccio, Charlotte Rosso, Paolo Bartolomeo, Mario Chavez, Fabrizio De Vico Fallani

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  7. 27
    Excitatory-inhibitory homeostasis and bifurcation control in the Wilson-Cowan model of cortical dynamics.

    Excitatory-inhibitory homeostasis and bifurcation control in the Wilson-Cowan model of cortical dynamics. by Francisco Páscoa Dos Santos, Paul F M J Verschure

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  8. 28
    Deciphering regulatory architectures of bacterial promoters from synthetic expression patterns.

    Deciphering regulatory architectures of bacterial promoters from synthetic expression patterns. by Rosalind Wenshan Pan, Tom Röschinger, Kian Faizi, Hernan G Garcia, Rob Phillips

    Published 2024-12-01
    “…PLoS Computational Biology…”
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  9. 29
    Extracting the fingerprints of sequences of random rhythmic auditory stimuli from electrophysiological data.

    Extracting the fingerprints of sequences of random rhythmic auditory stimuli from electrophysiological data. by Fernando A Najman, Antonio Galves, Marcela Svarc, Claudia D Vargas

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  10. 30
    Extracting interpretable signatures of whole-brain dynamics through systematic comparison.

    Extracting interpretable signatures of whole-brain dynamics through systematic comparison. by Annie G Bryant, Kevin Aquino, Linden Parkes, Alex Fornito, Ben D Fulcher

    Published 2024-12-01
    “…PLoS Computational Biology…”
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  11. 31
    Spherical harmonics texture extraction for versatile analysis of biological objects.

    Spherical harmonics texture extraction for versatile analysis of biological objects. by Oane Gros, Josiah B Passmore, Noa O Borst, Dominik Kutra, Wilco Nijenhuis, Timothy Fuqua, Lukas C Kapitein, Justin M Crocker, Anna Kreshuk, Simone Köhler

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  12. 32
    Multi-region infectious disease prediction modeling based on spatio-temporal graph neural network and the dynamic model.

    Multi-region infectious disease prediction modeling based on spatio-temporal graph neural network and the dynamic model. by Xiaoyi Wang, Zhen Jin

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  13. 33
    Role and modulation of various spinal pathways for human upper limb control in different gravity conditions.

    Role and modulation of various spinal pathways for human upper limb control in different gravity conditions. by Alice Bruel, Lina Bacha, Emma Boehly, Constance De Trogoff, Luca Represa, Gregoire Courtine, Auke Ijspeert

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  14. 34
    Neural spiking for causal inference and learning.

    Neural spiking for causal inference and learning. by Benjamin James Lansdell, Konrad Paul Kording

    Published 2023-04-01
    “…PLoS Computational Biology…”
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  15. 35
    Biomathematical enzyme kinetics model of prebiotic autocatalytic RNA networks: degenerating parasite-specific hyperparasite catalysts confer parasite resistance and herald the birth of molecular immunity.

    Biomathematical enzyme kinetics model of prebiotic autocatalytic RNA networks: degenerating parasite-specific hyperparasite catalysts confer parasite resistance and herald the birt... by Magnus Pirovino, Christian Iseli, Joseph A Curran, Bernard Conrad

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  16. 36
    Integration of partially observed multimodal and multiscale neural signals for estimating a neural circuit using dynamic causal modeling.

    Integration of partially observed multimodal and multiscale neural signals for estimating a neural circuit using dynamic causal modeling. by Jiyoung Kang, Hae-Jeong Park

    Published 2024-12-01
    “…PLoS Computational Biology…”
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  17. 37
    Social mates dynamically coordinate aggressive behavior to produce strategic territorial defense.

    Social mates dynamically coordinate aggressive behavior to produce strategic territorial defense. by Nicole M Moody, Cole M Williams, Sohini Ramachandran, Matthew J Fuxjager

    Published 2025-01-01
    “…PLoS Computational Biology…”
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  18. 38
    Design and implementation of an asynchronous online course-based undergraduate research experience (CURE) in computational genomics.

    Design and implementation of an asynchronous online course-based undergraduate research experience (CURE) in computational genomics. by Seema B Plaisier, Danielle O Alarid, Joelle A Denning, Sara E Brownell, Kenneth H Buetow, Katelyn M Cooper, Melissa A Wilson

    Published 2024-09-01
    “…PLoS Computational Biology…”
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  19. 39
    Ten quick tips to build a Model Life Cycle.

    Ten quick tips to build a Model Life Cycle. by Timothée Poisot, Daniel J Becker, Cole B Brookson, Ellie Graeden, Sadie J Ryan, Gemma Turon, Colin Carlson

    Published 2025-02-01
    “…PLoS Computational Biology…”
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  20. 40
    Predicting lung aging using scRNA-Seq data.

    Predicting lung aging using scRNA-Seq data. by Qi Song, Alex Singh, John E McDonough, Taylor S Adams, Robin Vos, Ruben De Man, Greg Myers, Laurens J Ceulemans, Bart M Vanaudenaerde, Wim A Wuyts, Xiting Yan, Jonas Schupp, James S Hagood, Naftali Kaminski, Ziv Bar-Joseph

    Published 2024-12-01
    “…PLoS Computational Biology…”
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