-
221
Strain-limited biofilm regulation through the Brg1-Rme1 circuit in Candida albicans
Published 2025-01-01“…These strains represent diverse clades and biofilm/filament production abilities. …”
Get full text
Article -
222
Systems Biology Profiling of AMD on the Basis of Gene Expression
Published 2013-01-01“…Cladograms exposed a highly heterogeneous transcriptomic profiles within all the conventional phenotypes. Moreover, clades and nodal synapomorphies did not support the classical AMD phenotypes as valid transcriptomal genotypes. …”
Get full text
Article -
223
Species delimitation in the Populus laurifolia complex (Salicaceae) based on phylogenetic and morphometric evidence
Published 2025-02-01“…The results revealed that this complex, based on a series of significant character states, could be morphologically distinguished into three species—P. laurifolia (Populus pilosa considered a synonym of P. laurifolia), Populus talassica, and Populus pamirica—which also correspond to three well-supported clades in the phylogenetic trees. P. pamirica exhibits some degree of ecological niche differentiation from P. talassica and P. laurifolia, whereas the latter two show minimal differentiation. …”
Get full text
Article -
224
A baenid turtle shell from the Mesaverde Formation (Campanian, Late Cretaceous) of Park County, Wyoming, USA
Published 2023-07-01“…To date, turtles within the formation have been represented primarily by isolated fragments diagnostic only to broader clades. A baenid specimen from the lower third of the Mesaverde Formation in the northwestern Bighorn Basin of Park County, Wyoming, includes a partial carapace and plastron and is the most complete turtle specimen yet described from the formation. …”
Get full text
Article -
225
Molecular Phylogenetic Relationships Based on Mitogenomes of Spider: Insights Into Evolution and Adaptation to Extreme Environments
Published 2025-01-01“…Our phylogenetic topology clearly explained the evolutionary relationships among the spiders, and divergence time estimates indicated that the spiders originated in the early Devonian, and that the two clades of Mesothelae and Opisthothelae separated in the late Carboniferous. …”
Get full text
Article -
226
Metagenomic global survey and in-depth genomic analyses of Ruminococcus gnavus reveal differences across host lifestyle and health status
Published 2025-01-01“…Analysis of these genomes and publicly available high-quality draft genomes (N = 333 genomes) revealed multiple clades which separated Crohn’s-derived isolates from healthy-derived isolates. …”
Get full text
Article -
227
Genetic tracking of Crimean-Congo haemorrhagic orthonairovirus in Hyalomma population infesting cattle in Nigeria.
Published 2025-01-01“…This study underscores the need for broader surveillance to understand the full spectrum of CCHFV strains and clades circulating in Nigeria.…”
Get full text
Article -
228
Population Structure Based on Microsatellite Length Polymorphism, Antifungal Susceptibility Profile, and Enzymatic Activity of <i>Candida auris</i> Clinical Isolates in Russia
Published 2025-01-01“…ITS sequencing confirmed that all isolates belonged to a single ITS cluster (clades I and III). Fifteen distinct STR genotypes were identified, with genotype I being dominant (<i>n</i> = 53). …”
Get full text
Article -
229
Molecular and morphology identification of Squat lobster (Family Galatheidae) in Seribu Islands, Jakarta
Published 2025-01-01“…The BLAST results on NCBI were identified as Allogalathea elegans, Allogalathea babai and Galathea sp. 2, which form 3 clades in the phylogenetic tree. Furthermore, we confirmed this type through morphological identification, which involves comparing the shape of the rostrum and the structure of the spines on the carapace. …”
Get full text
Article -
230
Probiogenomic analysis of Limosilactobacillus fermentum SD7, a probiotic candidate with remarkable aggregation abilities
Published 2025-02-01“…Using comprehensive genome analysis, we compared the genome of L. fermentum SD7 with 153 available genome sequences of L. fermentum strains and categorized the 154 strains into six distinct clades based on core gene single nucleotide polymorphisms. …”
Get full text
Article -
231
Identification and Characterization of the <i>ROP GTPase</i> Gene Family in Strawberry and the Positive Role of <i>FveROP4</i> in Fruit Resistance to Gray Mold
Published 2024-12-01“…Based on sequence homology, they were classified into three distinct phylogenetic clades. Detailed analysis of FveROP proteins revealed the presence of highly conserved catalytic G-domains, which are essential for their GTPase activity. …”
Get full text
Article -
232
Catfishes from the North-Western Part of Lake Tanganyika: Contribution to a Reference Library of DNA Barcodes
Published 2024-12-01“…However, barcoding does seem promising as all the individual species are resolved as clades. Within <i>Synodontis</i>, the study found a strong similarity between <i>S. grandiops</i> and <i>S. multipunctatus</i>, highlighting a need for revision. …”
Get full text
Article -
233
Phylogenetic analysis of dermatophytes isolated from small domestic animals
Published 2023-09-01“…The constructed phylogenetic trees reflecting the relationships of dermatophytes showed that, irrespective of the primer pairs used, the Microsporum and Trichophyton pathogens are in all cases reliably assigned to different clades. The analysis of ITS4F/ITS5R sequence fragment structures enabled the establish- ment of genetic relatedness between the Trichophyton benhamiae strains first isolated from cats in Russia and the Russian strain recovered from a guinea pig. …”
Get full text
Article -
234
Two new species of Plagiostomum (Prolecithophora, Plagiostomidae) from China with its morphology, phylogeny, and reproductive strategy
Published 2025-01-01“…Kimura’s two-parameter distance and phylogenetic analyses further support the recognition of these two new species, showing that the three specimens of P. nanhaiensis sp. nov. and P. plagae sp. nov. form two separate clades within Plagiostomum with solid support. Moreover, these two new species exhibit similar habits and reproductive strategies, adopting hypodermic impregnation. …”
Get full text
Article -
235
Comparative plastome analyses and evolutionary relationships of 25 East Asian species within the medicinal plant genus Scrophularia (Scrophulariaceae)
Published 2024-09-01“…We categorized the 25 East Asian Scrophularia species into six distinct clades and further explored their interspecies relationships using morphological characteristics, such as flower color, the relative position of stamens and corolla, and plant height. …”
Get full text
Article -
236
Genome-Wide Identification of Superoxide Dismutase (<i>SOD</i>) Gene Family in <i>Cymbidium</i> Species and Functional Analysis of <i>CsSOD</i>s Under Salt Stress in <i>Cymbidium s...
Published 2025-01-01“…These <i>SOD</i> genes were categorized into three clades: Cu/Zn-SOD, Fe-SOD, and Mn-SOD, with the Cu/Zn-SOD being the most abundant in these three types. …”
Get full text
Article -
237
Unravelling hybridization in Phytophthora using phylogenomics and genome size estimation
Published 2021-07-01“…Hybrid species have previously been identified in at least six of the 12 phylogenetic clades. These hybrids can potentially infect a wider host range and display enhanced vigour compared to their progenitors. …”
Get full text
Article -
238
Identification and functional characterization of the RPP13 gene family in potato (Solanum tuberosum L.) for disease resistance
Published 2025-01-01“…Phylogenetic analysis grouped these genes into four evolutionary clades, indicating a high level of conservation. Cis-regulatory element analysis identified that the promoter region of StRPP13-26 is enriched with pathogen-responsive elements such as the WUN-motif and MYC, suggesting its potential role in disease defense. …”
Get full text
Article -
239
Genome wide identification of MATE and ALMT gene family in lentil (Lens culinaris Medikus) and expression profiling under Al stress condition
Published 2025-01-01“…Method and results In this study, 90 MATE and 14 ALMT genes were identified and clustered into four (MATE) and five (ALMT) subfamilies/clades with smaller subgroups. All the MATE and ALMT genes were unevenly dispersed across lentil chromosomes. …”
Get full text
Article -
240
Utilisation of an in vivo malaria model to provide functional proof for RhopH1/CLAG essentiality and conserved orthology with P. falciparum
Published 2025-02-01“…Results It was revealed P. berghei CLAGX and CLAG9, which belong to two distinct phylogenetic clades, have separate non-complementary functions, and that clagX is the functional orthologue of P. falciparum clag3. …”
Get full text
Article