Dual-nuclease single-cell lineage tracing by Cas9 and Cas12a by Cheng Chen, Yuanxin Liao, Miao Zhu, Li Wang, Xinran Yu, Meishi Li, Guangdun Peng

Subjects: “…CP: Genomics…”
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Physiological role and mechanisms of action for a long noncoding haplotype region by Hong Xue, Manoj K. Mishra, Yong Liu, Pengyuan Liu, Michael Grzybowski, Rajan Pandey, Kristie Usa, Mark A. Vanden Avond, Niharika Bala, Abdel A. Alli, Allen W. Cowley, Jr., Qiongzi Qiu, Andrew S. Greene, Sridhar Rao, Caitlin C. O'Meara, Aron M. Geurts, Mingyu Liang

Subjects: “…CP: Genomics…”
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Genome of a stage-dependent cave-dwelling frog reveals the genetic mechanism of an extremely divergent biphasic life cycle by Ningning Lu, Wei Zhu, Chen-Yang Tang, Chaochao Yan, Qiheng Chen, Wei Wu, Liming Chang, Jianping Jiang, Jia-Tang Li, Bin Wang

Subjects: “…CP: Genomics…”
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Complete reference genome and pangenome improve genome-wide detection and interpretation of DNA methylation using sequencing and array data by Zheng Dong, Joanne Whitehead, Maggie Fu, Julia L. MacIsaac, David H. Rehkopf, Luis Rosero-Bixby, Michael S. Kobor, Keegan Korthauer

Subjects: “…CP: Genomics…”
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Nine high-quality Anas genomes provide new insights into Anas evolution and domestication by Zhou Zhang, Zijia Ni, Te Li, Mengfei Ning, Chuze Gao, Jiaxiang Hu, Mengying Han, Jiawen Yang, Fusheng Wu, Li Chen, Lizhi Lu, Zhongzi Wu, Huashui Ai, Yinhua Huang

Subjects: “…CP: Genomics…”
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Effects of aging on gene expression networks in the Drosophila genetic reference panel by Suxu Tan, Mary Anna Carbone, Shanshan Zhou, Tatiana Morozova, Gunjan Arya, Fei Zhang, Robert R.H. Anholt, Wen Huang, Trudy F.C. Mackay

Subjects: “…CP: Genomics…”
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Host genomic convergence, rather than gut microbiome convergence, underlies the convergent evolution of subterranean adaptation in mammals by Kexin Li, Yixin Liu, Yehao Zhang, Zhenxin Fan, Xiangxu Hu, Xinlei Lai, Fuwen Wei, Yibo Hu

Subjects: “…CP: Genomics…”
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Dynamic history of the Central Plain and Haidai region inferred from Late Neolithic to Iron Age ancient human genomes by Hui Fang, Fawei Liang, Hao Ma, Rui Wang, Haifeng He, Limin Qiu, Le Tao, Kongyang Zhu, Weihua Wu, Long Ma, Huazhen Zhang, Shuqing Chen, Chao Zhu, Haodong Chen, Yu Xu, Yongsheng Zhao, Haiwang Liu, Chuan-Chao Wang

Subjects: “…CP: Genomics…”
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Q&A with Ke Wang by Ke Wang

Subjects: “…CP: Genomics…”
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Landscape of structural variants reveals insights for local adaptations in the Asian corn borer by Yan Peng, Kaikai Mao, Zhuting Zhang, Junfen Ping, Minghui Jin, Xinye Liu, Chao Wu, Chongjun Zhao, Peng Wang, Xueqing Duan, Songmiao Yu, Zhimin Li, Jimin Liu, Hongran Li, Alexander Yesaya, Lin Chen, Hongru Wang, Kenneth Wilson, Yutao Xiao

Subjects: “…CP: Genomics…”
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Haplotype-resolved genomes provide insights into the origins and functional significance of genome diversity in bivalves by Shikai Liu, Chenyu Shi, Chenguang Chen, Ying Tan, Yuan Tian, Daniel J. Macqueen, Qi Li

Subjects: “…CP: Genomics…”
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Spatiotemporal profiling reveals the impact of caloric restriction in the aging mammalian brain by Zehao Zhang, Alexander Epstein, Chloe Schaefer, Abdulraouf Abdulraouf, Weirong Jiang, Wei Zhou, Junyue Cao

Subjects: “…CP: Genomics…”
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Karyotype evolution in response to chemoradiotherapy and upon recurrence of esophageal adenocarcinomas by Karen van der Sluis, Johanna W. van Sandick, Willem J. Koemans, Tom van den Bosch, Annegien Broeks, Dennis Peters, Iris M. Seignette, Christian R. Rausch, Erik van Dijk, Petur Snaebjornsson, José G. van den Berg, Nicole C.T. van Grieken, Bauke Ylstra, Beatriz Carvalho, Daniël M. Miedema, Liudmila L. Kodach

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Early-life development of the gut virome and plasmidome: A longitudinal study in cesarean-born infants by Asier Fernández-Pato, Trishla Sinha, Sanzhima Garmaeva, Anastasia Gulyaeva, Nataliia Kuzub, Simon Roux, Jingyuan Fu, Alexander Kurilshikov, Alexandra Zhernakova

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Coordinated expression of retained introns and poison exons in renal cell carcinoma by José C. Martínez, Mi Zhou, Gilbert Giri, Yi-Hsuan Tsai, Meghan M. Rowley, Grant A. Goda, Maria M. Aleman, William Y. Kim, Daniel Dominguez

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Integrative single-cell multi-omics profiling of human pancreatic islets identifies T1D-associated genes and regulatory signals by Ricardo D'Oliveira Albanus, Xiaoshan Zhang, Zeping Zhao, Henry J. Taylor, Xuming Tang, Yuling Han, Peter Orchard, Arushi Varshney, Tuo Zhang, Nandini Manickam, Michael R. Erdos, Narisu Narisu, Leland Taylor, Xiaxia Saavedra, Xinyi Liu, Aaron Zhong, Bo Li, Ting Zhou, Ali Naji, Chengyang Liu, Francis S. Collins, Stephen C.J. Parker, Shuibing Chen

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ALS molecular subtypes are a combination of cellular and pathological features learned by deep multiomics classifiers by Kathryn O’Neill, Regina Shaw, Isobel Bolger, Oliver H. Tam, Hemali Phatnani, Molly Gale Hammell

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Single-nucleus neuronal transcriptional profiling of male C. elegans uncovers regulators of sex-specific and sex-shared behaviors by Katherine S. Morillo, Jonathan St. Ange, Yifei Weng, Rachel Kaletsky, Coleen T. Murphy

Subjects: “…CP: Genomics…”
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LncRNA SLNCR phenocopies the E2F1 DNA binding site to promote melanoma progression by Kushani Shah, Eleni Anastasakou, Leinal Sejour, Yufei Wang, Leon Wert-Lamas, Christopher Rauchet, Sabine Studer, Simon Goller, Robert J. Distel, Wayne Marasco, Lalith Perera, Ioannis S. Vlachos, Carl D. Novina

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Integrative genomic identification of therapeutic targets for pancreatic cancer by Jimmy A. Guo, Dennis Gong, Kyle Evans, Kazuki Takahashi, Ananya D. Jambhale, Carina Shiau, Patrick Yu, Steven Wang, Wenbo W. Wu, Seema Chugh, Kevin S. Kapner, Julien Dilly, Daniel Zhao, Peter Chen, Eric L. Smith, Joseph D. Mancias, Francisca Vazquez, Harshabad Singh, William L. Hwang, Andrew J. Aguirre

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