Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes by Haoyu Wu, Annie S. P. Yang, Suzan Stelloo, Floris J. M. Roos, René H. M. te Morsche, Anne H. Verkerk, Maria V. Luna-Velez, Laura Wingens, Johannes H. W. de Wilt, Robert W. Sauerwein, Klaas W. Mulder, Simon J. van Heeringen, Monique M. A. Verstegen, Luc J. W. van der Laan, Hendrik Marks, Richárd Bártfai

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Leveraging public AI tools to explore systems biology resources in mathematical modeling by Meera Kannan, Gabrielle Bridgewater, Ming Zhang, Michael L. Blinov

“…Our approach can enhance the accessibility of systems biology for non-system biologists and help them understand systems biology without a deep learning curve.…”
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An Efficient Approach to Mining Maximal Contiguous Frequent Patterns from Large DNA Sequence Databases by Md. Rezaul Karim, Md. Mamunur Rashid, Byeong-Soo Jeong, Ho-Jin Choi

“…Maximal contiguous frequent patterns are preferable for expressing the function and structure of DNA sequences and hence can capture the common data characteristics among related sequences. Biologists are interested in finding frequent orderly arrangements of motifs that are responsible for similar expression of a group of genes. …”
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Self-similarity and synthetic biology: a possible fractal anticipation by Robert Meckin

“…Yet, there is a sense in the field of history repeating as synthetic biologists repeatedly deal with similar challenges. …”
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Koi Herpesvirus Disease (KHVD) by Kathleen H. Hartman, Roy P. Yanong, Deborah B. Pouder, Barbara Denise Petty, Ruth Francis-Floyd, Allen C. Riggs, Thomas B. Waltzek

“…This 9-page fact sheet is intended to inform veterinarians, biologists, fish producers and hobbyists about KHV disease. …”
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Oncogenic processes: a neglected parameter in the evolutionary ecology of animals by Thomas, Frédéric, Asselin, Klara, MacDonald, Nick, Brazier, Lionel, Meliani, Jordan, Ujvari, Beata, Dujon, Antoine Marie

“…In recent years, however, the community of ecologists and evolutionary biologists has recognized the pivotal role of cancer-related issues in the evolutionary paths of various species, influencing multiple facets of their biology. …”
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Synthèse et conclusions sur la gestion durable des zones côtières et marines. Au-delà des discours, des enjeux opérationnels pour le développement durable ? by Agnès Michelot

“…Presentations from lawyers, political scientists, biologists and geographers contribute to present a cross approach on the concept of Integrated Coastal Zone Management (ICZM) oriented to the maritime dimension. …”
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Koi Herpesvirus Disease (KHVD) by Kathleen H. Hartman, Roy P. Yanong, Deborah B. Pouder, Barbara Denise Petty, Ruth Francis-Floyd, Allen C. Riggs, Thomas B. Waltzek

“…This 9-page fact sheet is intended to inform veterinarians, biologists, fish producers and hobbyists about KHV disease. …”
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Current Advances in Molecular Imaging: Noninvasive in Vivo Bioluminescent and Fluorescent Optical Imaging in Cancer Research by Garry Choy, Peter Choyke, Steven K Libutti

“…The development of highly sensitive light detection systems has allowed biologists to use imaging in studying physiological processes. …”
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VBioindex: A Visual Tool to Estimate Biodiversity by Dong Su Yu, Seung Hwa Yoo

“…In the fields of biological research, biodiversity is widely measured using traditional statistical indices such as the Shannon-Wiener index, species richness, evenness, and relative dominance of species. However, some biologists and ecologists have difficulty using these indices because they require advanced mathematical knowledge and computational techniques. …”
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Parallelizing the cryo‐EM structure determination in THUNDER using GPU cluster by Zhao Wang, Huabin Ruan, Guangwen Yang, Xueming Li

“…Abstract Electron cryo‐microscopy (cryo‐EM) is a powerful tool utilized by biologists for understanding the mysteries of life. …”
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Corps embryoïdes : biologie moléculaire et cellules vivantes by Noémie Merleau-Ponty

“…The article shows how some biologists react with strong emotions that link the cells to a kind of autonomy. …”
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The cell as secret agent—autonomy and intelligence of the living cell: driving force of development by Brian J. Ford

“…We cannot comprehend the realities of population dynamics and evolutionary impetus without the cell being at the heart of our considerations. Biologists emphasize the importance of the organism, and imperatives derived from Cartesian reductionism underpin contemporary interpretations of multicellular organisms and the manifestation of life in protists. …”
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Koi Herpes Virus (KHV) Disease by Kathleen H. Hartman, Roy P.E. Yanong, B. Denise Petty, Ruth Francis-Floyd, Allen C. Riggs

“…This information sheet is intended to inform veterinarians, biologists, culturists, and hobbyists about KHV. This document is Fact Sheet VM-149, one of a series from the Department of Large Animal Clinical Sciences (College of Veterinary Medicine), Florida Cooperative Extension Service, Institute of Food and Agricultural Sciences, University of Florida. …”
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Koi Herpes Virus (KHV) Disease by Kathleen H. Hartman, Roy P.E. Yanong, B. Denise Petty, Ruth Francis-Floyd, Allen C. Riggs

“…This information sheet is intended to inform veterinarians, biologists, culturists, and hobbyists about KHV. This document is Fact Sheet VM-149, one of a series from the Department of Large Animal Clinical Sciences (College of Veterinary Medicine), Florida Cooperative Extension Service, Institute of Food and Agricultural Sciences, University of Florida. …”
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The Ecology and Evolutionary Biology of Cancer: A Review of Mathematical Models of Necrosis and Tumor Cell Diversity by John D. Nagy

“…Recent evidence elucidating the relationship between parenchyma cells and otherwise ''healthy'' cells in malignant neoplasms is forcing cancer biologists to expand beyond the genome-centered, ''one-renegade-cell'' theory of cancer. …”
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Nonprotein Structures from Mycobacteria: Emerging Actors for Tuberculosis Control by Luz M. Lopez-Marin

“…But the atypical, highly impermeable and waxy coat of mycobacteria captured the interest of structural biologists very early, allowing the description of amazing molecules, such as previously unknown carbohydrates or fatty acids of astonishing lengths. …”
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Nf-Root: A Best-Practice Pipeline for Deep-Learning-Based Analysis of Apoplastic pH in Microscopy Images of Developmental Zones in Plant Root Tissue by Julian Wanner, Luis Kuhn Cuellar, Luiselotte Rausch, Kenneth W. Berendzen, Friederike Wanke, Gisela Gabernet, Klaus Harter, Sven Nahnsen

“…In short, a deep-learning module deploys deterministically trained convolutional neural network models and augments the segmentation predictions with measures of prediction uncertainty and model interpretability, while aiming to facilitate result interpretation and verification by experienced plant biologists. We observed a high statistical similarity between the manually generated results and the output of the nf-root.…”
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The status of mycology in Africa: A document to promote awareness by M. Gryzenhout, J.M. Jefwa, N.S. Yorou

“…This contribution serves as a document to summarise these in a form that can be presented to fellow mycologists, biologists and other scientists, relevant government departments, funding bodies and Non-Governmental Organizations and that pins down the importance of mycology, the status thereof in Africa and the need to promote it more.…”
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Evolutionary Synthesis in the Social Sciences and Humanities by Mesoudi Alex

“…Here, I review research conducted in the last 30 years that has built a Darwinian theory of cultural change by borrowing the rigorous, quantitative methods developed by biologists to explain biological evolution, yet simultaneously acknowledging the differences between cultural and genetic evolution. …”
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