Alu Mobile Elements: From Junk DNA to Genomic Gems

Alus, the short interspersed repeated sequences (SINEs), are retrotransposons that litter the human genomes and have long been considered junk DNA. However, recent findings that these mobile elements are transcribed, both as distinct RNA polymerase III transcripts and as a part of RNA polymerase II...

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Main Author: Sami Dridi
Format: Article
Language:English
Published: Wiley 2012-01-01
Series:Scientifica
Online Access:http://dx.doi.org/10.6064/2012/545328
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author Sami Dridi
author_facet Sami Dridi
author_sort Sami Dridi
collection DOAJ
description Alus, the short interspersed repeated sequences (SINEs), are retrotransposons that litter the human genomes and have long been considered junk DNA. However, recent findings that these mobile elements are transcribed, both as distinct RNA polymerase III transcripts and as a part of RNA polymerase II transcripts, suggest biological functions and refute the notion that Alus are biologically unimportant. Indeed, Alu RNAs have been shown to control mRNA processing at several levels, to have complex regulatory functions such as transcriptional repression and modulating alternative splicing and to cause a host of human genetic diseases. Alu RNAs embedded in Pol II transcripts can promote evolution and proteome diversity, which further indicates that these mobile retroelements are in fact genomic gems rather than genomic junks.
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spelling doaj-art-ff07830e2a78428283e3b6b1af6238472025-02-03T05:59:37ZengWileyScientifica2090-908X2012-01-01201210.6064/2012/545328545328Alu Mobile Elements: From Junk DNA to Genomic GemsSami Dridi0Nutrition Research Institute, The University of North Carolina at Chapel Hill, 500 Laureate Way, Kannapolis, NC 28081, USAAlus, the short interspersed repeated sequences (SINEs), are retrotransposons that litter the human genomes and have long been considered junk DNA. However, recent findings that these mobile elements are transcribed, both as distinct RNA polymerase III transcripts and as a part of RNA polymerase II transcripts, suggest biological functions and refute the notion that Alus are biologically unimportant. Indeed, Alu RNAs have been shown to control mRNA processing at several levels, to have complex regulatory functions such as transcriptional repression and modulating alternative splicing and to cause a host of human genetic diseases. Alu RNAs embedded in Pol II transcripts can promote evolution and proteome diversity, which further indicates that these mobile retroelements are in fact genomic gems rather than genomic junks.http://dx.doi.org/10.6064/2012/545328
spellingShingle Sami Dridi
Alu Mobile Elements: From Junk DNA to Genomic Gems
Scientifica
title Alu Mobile Elements: From Junk DNA to Genomic Gems
title_full Alu Mobile Elements: From Junk DNA to Genomic Gems
title_fullStr Alu Mobile Elements: From Junk DNA to Genomic Gems
title_full_unstemmed Alu Mobile Elements: From Junk DNA to Genomic Gems
title_short Alu Mobile Elements: From Junk DNA to Genomic Gems
title_sort alu mobile elements from junk dna to genomic gems
url http://dx.doi.org/10.6064/2012/545328
work_keys_str_mv AT samidridi alumobileelementsfromjunkdnatogenomicgems