Hypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilms

Abstract Biofilms are critical in the persistence of Pseudomonas aeruginosa infections, particularly in cystic fibrosis patients. This study explores the adaptive mechanisms behind the phenotypic switching between Small Colony Variants (SCVs) and revertant states in P. aeruginosa biofilms, emphasizi...

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Main Authors: Romina A. Tobares, Román A. Martino, Claudia A. Colque, Gaston L. Castillo Moro, Alejandro J. Moyano, Andrea G. Albarracín Orio, Andrea M. Smania
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:npj Biofilms and Microbiomes
Online Access:https://doi.org/10.1038/s41522-024-00644-z
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author Romina A. Tobares
Román A. Martino
Claudia A. Colque
Gaston L. Castillo Moro
Alejandro J. Moyano
Andrea G. Albarracín Orio
Andrea M. Smania
author_facet Romina A. Tobares
Román A. Martino
Claudia A. Colque
Gaston L. Castillo Moro
Alejandro J. Moyano
Andrea G. Albarracín Orio
Andrea M. Smania
author_sort Romina A. Tobares
collection DOAJ
description Abstract Biofilms are critical in the persistence of Pseudomonas aeruginosa infections, particularly in cystic fibrosis patients. This study explores the adaptive mechanisms behind the phenotypic switching between Small Colony Variants (SCVs) and revertant states in P. aeruginosa biofilms, emphasizing hypermutability due to Mismatch Repair System (MRS) deficiencies. Through experimental evolution and whole-genome sequencing, we show that both wild-type and mutator strains undergo parallel evolution by accumulating compensatory mutations in factors regulating intracellular c-di-GMP levels, particularly in the Wsp and Yfi systems. While wild-type strains face genetic constraints, mutator strains bypass these by accessing alternative genetic pathways regulating c-di-GMP and biofilm formation. This increased genetic accessibility, driven by higher mutation rates and specific mutational biases, supports sustained cycles of SCV conversion and reversion. Our findings underscore the crucial role of hypermutability in P. aeruginosa adaptation, with significant implications for managing persistent infections in clinical settings.
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spelling doaj-art-dc0aacab318147a7907b4a208c8c03632025-01-19T12:12:20ZengNature Portfolionpj Biofilms and Microbiomes2055-50082025-01-0111111510.1038/s41522-024-00644-zHypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilmsRomina A. Tobares0Román A. Martino1Claudia A. Colque2Gaston L. Castillo Moro3Alejandro J. Moyano4Andrea G. Albarracín Orio5Andrea M. Smania6Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Biológica “Ranwel Caputto”Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Biológica “Ranwel Caputto”Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Biológica “Ranwel Caputto”Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Biológica “Ranwel Caputto”Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Biológica “Ranwel Caputto”Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Biológica “Ranwel Caputto”Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Biológica “Ranwel Caputto”Abstract Biofilms are critical in the persistence of Pseudomonas aeruginosa infections, particularly in cystic fibrosis patients. This study explores the adaptive mechanisms behind the phenotypic switching between Small Colony Variants (SCVs) and revertant states in P. aeruginosa biofilms, emphasizing hypermutability due to Mismatch Repair System (MRS) deficiencies. Through experimental evolution and whole-genome sequencing, we show that both wild-type and mutator strains undergo parallel evolution by accumulating compensatory mutations in factors regulating intracellular c-di-GMP levels, particularly in the Wsp and Yfi systems. While wild-type strains face genetic constraints, mutator strains bypass these by accessing alternative genetic pathways regulating c-di-GMP and biofilm formation. This increased genetic accessibility, driven by higher mutation rates and specific mutational biases, supports sustained cycles of SCV conversion and reversion. Our findings underscore the crucial role of hypermutability in P. aeruginosa adaptation, with significant implications for managing persistent infections in clinical settings.https://doi.org/10.1038/s41522-024-00644-z
spellingShingle Romina A. Tobares
Román A. Martino
Claudia A. Colque
Gaston L. Castillo Moro
Alejandro J. Moyano
Andrea G. Albarracín Orio
Andrea M. Smania
Hypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilms
npj Biofilms and Microbiomes
title Hypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilms
title_full Hypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilms
title_fullStr Hypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilms
title_full_unstemmed Hypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilms
title_short Hypermutability bypasses genetic constraints in SCV phenotypic switching in Pseudomonas aeruginosa biofilms
title_sort hypermutability bypasses genetic constraints in scv phenotypic switching in pseudomonas aeruginosa biofilms
url https://doi.org/10.1038/s41522-024-00644-z
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