A computationally tractable birth-death model that combines phylogenetic and epidemiological data.

Inferring the dynamics of pathogen transmission during an outbreak is an important problem in infectious disease epidemiology. In mathematical epidemiology, estimates are often informed by time series of confirmed cases, while in phylodynamics genetic sequences of the pathogen, sampled through time,...

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Bibliographic Details
Main Authors: Alexander Eugene Zarebski, Louis du Plessis, Kris Varun Parag, Oliver George Pybus
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2022-02-01
Series:PLoS Computational Biology
Online Access:https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1009805&type=printable
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