Ecological drivers of evolution of swine influenza in the United States: a review

Influenza A viruses (IAVs) pose a major public health threat due to their wide host range and pandemic potential. Pigs have been proposed as “mixing vessels” for avian, swine, and human IAVs, significantly contributing to influenza ecology. In the United States, IAVs are enzootic in commercial swine...

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Main Authors: Varun Goel, Jessica Ding, Bijaya Hatuwal, Emily Giri, Thomas J. Deliberto, James Lowe, Richard Webby, Michael Emch, Xiu-Feng Wan
Format: Article
Language:English
Published: Taylor & Francis Group 2025-12-01
Series:Emerging Microbes and Infections
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Online Access:https://www.tandfonline.com/doi/10.1080/22221751.2025.2455598
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author Varun Goel
Jessica Ding
Bijaya Hatuwal
Emily Giri
Thomas J. Deliberto
James Lowe
Richard Webby
Michael Emch
Xiu-Feng Wan
author_facet Varun Goel
Jessica Ding
Bijaya Hatuwal
Emily Giri
Thomas J. Deliberto
James Lowe
Richard Webby
Michael Emch
Xiu-Feng Wan
author_sort Varun Goel
collection DOAJ
description Influenza A viruses (IAVs) pose a major public health threat due to their wide host range and pandemic potential. Pigs have been proposed as “mixing vessels” for avian, swine, and human IAVs, significantly contributing to influenza ecology. In the United States, IAVs are enzootic in commercial swine farming operations, with numerous genetic and antigenic IAV variants having emerged in the past two decades. However, the dynamics of intensive swine farming systems and their interactions with ecological factors influencing IAV evolution have not been systematically analysed. This review examines the evolution of swine IAVs in commercial farms, highlighting the role of multilevel ecological factors. A total of 61 articles published after 2000 were reviewed, with most studies conducted after 2009 in Midwestern US, followed by Southeast and South-central US. The findings reveal that ecological factors at multiple spatial scales, such as regional transportation networks, interconnectedness of swine operations, farm environments, and presence of high-density, low-genetic diversity herds, can facilitate virus transmission and enhance virus evolution. Additionally, interactions at various interfaces, such as between commercial swine and feral swine, humans, or wild birds contribute to the increase in genetic diversity of swine IAVs. The review underscores the need for comprehensive studies and improved data collection to better understand the ecological dynamics influencing swine IAV evolution. This understanding is crucial for mitigating disease burden in swine production and reducing the risk of zoonotic influenza outbreaks.
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spelling doaj-art-d1facc085e5c42208b40ca78f0b282252025-01-29T04:55:04ZengTaylor & Francis GroupEmerging Microbes and Infections2222-17512025-12-0114110.1080/22221751.2025.2455598Ecological drivers of evolution of swine influenza in the United States: a reviewVarun Goel0Jessica Ding1Bijaya Hatuwal2Emily Giri3Thomas J. Deliberto4James Lowe5Richard Webby6Michael Emch7Xiu-Feng Wan8Department of Geography, University of South Carolina, Columbia, SC, USADepartment of Geography and Environment, University of North Carolina, Chapel Hill, NC, USANexGen Center for Influenza and Emerging Infectious Diseases, University of Missouri, Columbia, MO, USANexGen Center for Influenza and Emerging Infectious Diseases, University of Missouri, Columbia, MO, USAUS Department of Agriculture Animal and Plant Health Inspection Service, Fort Collins, CO, USADepartment of Veterinary Clinical Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USADepartment of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, TN, USADepartment of Geography and Environment, University of North Carolina, Chapel Hill, NC, USANexGen Center for Influenza and Emerging Infectious Diseases, University of Missouri, Columbia, MO, USAInfluenza A viruses (IAVs) pose a major public health threat due to their wide host range and pandemic potential. Pigs have been proposed as “mixing vessels” for avian, swine, and human IAVs, significantly contributing to influenza ecology. In the United States, IAVs are enzootic in commercial swine farming operations, with numerous genetic and antigenic IAV variants having emerged in the past two decades. However, the dynamics of intensive swine farming systems and their interactions with ecological factors influencing IAV evolution have not been systematically analysed. This review examines the evolution of swine IAVs in commercial farms, highlighting the role of multilevel ecological factors. A total of 61 articles published after 2000 were reviewed, with most studies conducted after 2009 in Midwestern US, followed by Southeast and South-central US. The findings reveal that ecological factors at multiple spatial scales, such as regional transportation networks, interconnectedness of swine operations, farm environments, and presence of high-density, low-genetic diversity herds, can facilitate virus transmission and enhance virus evolution. Additionally, interactions at various interfaces, such as between commercial swine and feral swine, humans, or wild birds contribute to the increase in genetic diversity of swine IAVs. The review underscores the need for comprehensive studies and improved data collection to better understand the ecological dynamics influencing swine IAV evolution. This understanding is crucial for mitigating disease burden in swine production and reducing the risk of zoonotic influenza outbreaks.https://www.tandfonline.com/doi/10.1080/22221751.2025.2455598Influenza A virusswine Influenza virusH1N1H3N2ecologycommercial swine farm
spellingShingle Varun Goel
Jessica Ding
Bijaya Hatuwal
Emily Giri
Thomas J. Deliberto
James Lowe
Richard Webby
Michael Emch
Xiu-Feng Wan
Ecological drivers of evolution of swine influenza in the United States: a review
Emerging Microbes and Infections
Influenza A virus
swine Influenza virus
H1N1
H3N2
ecology
commercial swine farm
title Ecological drivers of evolution of swine influenza in the United States: a review
title_full Ecological drivers of evolution of swine influenza in the United States: a review
title_fullStr Ecological drivers of evolution of swine influenza in the United States: a review
title_full_unstemmed Ecological drivers of evolution of swine influenza in the United States: a review
title_short Ecological drivers of evolution of swine influenza in the United States: a review
title_sort ecological drivers of evolution of swine influenza in the united states a review
topic Influenza A virus
swine Influenza virus
H1N1
H3N2
ecology
commercial swine farm
url https://www.tandfonline.com/doi/10.1080/22221751.2025.2455598
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