Modelling fungal colonies and communities: challenges and opportunities

This contribution, based on a Special Interest Group session held during IMC9, focuses on physiological based models of filamentous fungal colony growth and interactions. Fungi are known to be an important component of ecosystems, in terms of colony dynamics and interactions within and between troph...

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Main Authors: R.E. Falconer, J.L. Bown, E. McAdam, P. Perez-Reche, A.T. Sampson, J. van den Bulcke, N.A. White
Format: Article
Language:English
Published: BMC 2010-12-01
Series:IMA Fungus
Online Access:http://FORAGING; FUNGAL GROWTH; INTERACTIONS; INVASIONS; MYCELIA; NETWORKS
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author R.E. Falconer
J.L. Bown
E. McAdam
P. Perez-Reche
A.T. Sampson
J. van den Bulcke
N.A. White
author_facet R.E. Falconer
J.L. Bown
E. McAdam
P. Perez-Reche
A.T. Sampson
J. van den Bulcke
N.A. White
author_sort R.E. Falconer
collection DOAJ
description This contribution, based on a Special Interest Group session held during IMC9, focuses on physiological based models of filamentous fungal colony growth and interactions. Fungi are known to be an important component of ecosystems, in terms of colony dynamics and interactions within and between trophic levels. We outline some of the essential components necessary to develop a fungal ecology: a mechanistic model of fungal colony growth and interactions, where observed behaviour can be linked to underlying function; a model of how fungi can cooperate at larger scales; and novel techniques for both exploring quantitatively the scales at which fungi operate; and addressing the computational challenges arising from this highly detailed quantification. We also propose a novel application area for fungi which may provide alternate routes for supporting scientific study of colony behaviour. This synthesis offers new potential to explore fungal community dynamics and the impact on ecosystem functioning.
format Article
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institution Kabale University
issn 2210-6340
2210-6359
language English
publishDate 2010-12-01
publisher BMC
record_format Article
series IMA Fungus
spelling doaj-art-cfd6c8657d5849ac8b022fe5e66661f92025-02-02T15:02:42ZengBMCIMA Fungus2210-63402210-63592010-12-0112155159Modelling fungal colonies and communities: challenges and opportunitiesR.E. FalconerJ.L. BownE. McAdamP. Perez-RecheA.T. SampsonJ. van den BulckeN.A. WhiteThis contribution, based on a Special Interest Group session held during IMC9, focuses on physiological based models of filamentous fungal colony growth and interactions. Fungi are known to be an important component of ecosystems, in terms of colony dynamics and interactions within and between trophic levels. We outline some of the essential components necessary to develop a fungal ecology: a mechanistic model of fungal colony growth and interactions, where observed behaviour can be linked to underlying function; a model of how fungi can cooperate at larger scales; and novel techniques for both exploring quantitatively the scales at which fungi operate; and addressing the computational challenges arising from this highly detailed quantification. We also propose a novel application area for fungi which may provide alternate routes for supporting scientific study of colony behaviour. This synthesis offers new potential to explore fungal community dynamics and the impact on ecosystem functioning.FORAGING; FUNGAL GROWTH; INTERACTIONS; INVASIONS; MYCELIA; NETWORKS
spellingShingle R.E. Falconer
J.L. Bown
E. McAdam
P. Perez-Reche
A.T. Sampson
J. van den Bulcke
N.A. White
Modelling fungal colonies and communities: challenges and opportunities
IMA Fungus
title Modelling fungal colonies and communities: challenges and opportunities
title_full Modelling fungal colonies and communities: challenges and opportunities
title_fullStr Modelling fungal colonies and communities: challenges and opportunities
title_full_unstemmed Modelling fungal colonies and communities: challenges and opportunities
title_short Modelling fungal colonies and communities: challenges and opportunities
title_sort modelling fungal colonies and communities challenges and opportunities
url http://FORAGING; FUNGAL GROWTH; INTERACTIONS; INVASIONS; MYCELIA; NETWORKS
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AT pperezreche modellingfungalcoloniesandcommunitieschallengesandopportunities
AT atsampson modellingfungalcoloniesandcommunitieschallengesandopportunities
AT jvandenbulcke modellingfungalcoloniesandcommunitieschallengesandopportunities
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