Protocol to boost the robustness and accuracy of spatial transcriptomics algorithms using ensemble techniques

Protocol to boost the robustness and accuracy of spatial transcriptomics algorithms using ensemble techniques

Summary: Spatial transcriptomics enhances our understanding of cellular organization by mapping gene expression data to precise tissue locations. Here, we present a protocol for using weighted ensemble method for spatial transcriptomics (WEST), which uses ensemble techniques to boost the robustness...

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Bibliographic Details
Main Authors: Jiazhang Cai, Shushan Wu, Huimin Cheng, Wenxuan Zhong, Guo-Cheng Yuan, Ping Ma
Format: Article
Language:English
Published: Elsevier 2025-03-01
Series:STAR Protocols
Subjects:
bioinformatics
genomics
RNA-seq
computer sciences
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166725000140
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