Feature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clusters

Abstract Obtaining microscopic structure-property relationships for grain boundaries is challenging due to their complex atomic structures. Recent efforts use machine learning to derive these relationships, but the way the atomic grain boundary structure is represented can have a significant impact...

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Main Authors: C. Braxton Owens, Nithin Mathew, Tyce W. Olaveson, Jacob P. Tavenner, Edward M. Kober, Garritt J. Tucker, Gus L. W. Hart, Eric R. Homer
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:npj Computational Materials
Online Access:https://doi.org/10.1038/s41524-024-01509-x
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author C. Braxton Owens
Nithin Mathew
Tyce W. Olaveson
Jacob P. Tavenner
Edward M. Kober
Garritt J. Tucker
Gus L. W. Hart
Eric R. Homer
author_facet C. Braxton Owens
Nithin Mathew
Tyce W. Olaveson
Jacob P. Tavenner
Edward M. Kober
Garritt J. Tucker
Gus L. W. Hart
Eric R. Homer
author_sort C. Braxton Owens
collection DOAJ
description Abstract Obtaining microscopic structure-property relationships for grain boundaries is challenging due to their complex atomic structures. Recent efforts use machine learning to derive these relationships, but the way the atomic grain boundary structure is represented can have a significant impact on the predictions. Key steps for property prediction common to grain boundaries and other variable-sized atom clustered structures include: (1) describing the atomic structure as a feature matrix, (2) transforming the variable-sized feature matrix to a fixed length common to all structures, and (3) applying a machine learning algorithm to predict properties from the transformed matrices. We examine how these steps and different combinations of engineered features impact the accuracy of grain boundary energy predictions using a database of over 7000 grain boundaries. Additionally, we assess how different engineered features support interpretability, offering insights into the physics of the structure-property relationships.
format Article
id doaj-art-cabde7a42428430bacac08c9f4cac5ef
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issn 2057-3960
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publisher Nature Portfolio
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series npj Computational Materials
spelling doaj-art-cabde7a42428430bacac08c9f4cac5ef2025-01-26T12:43:03ZengNature Portfolionpj Computational Materials2057-39602025-01-0111111510.1038/s41524-024-01509-xFeature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clustersC. Braxton Owens0Nithin Mathew1Tyce W. Olaveson2Jacob P. Tavenner3Edward M. Kober4Garritt J. Tucker5Gus L. W. Hart6Eric R. Homer7Department of Computer Science, Brigham Young UniversityGroup T-1, Theoretical Division, Los Alamos National LaboratoryDepartment of Physics and Astronomy, Brigham Young UniversityKBR, Inc., Intelligent Systems Division, NASA Ames Research CenterGroup T-1, Theoretical Division, Los Alamos National LaboratoryDepartment of Physics, Baylor UniversityDepartment of Physics and Astronomy, Brigham Young UniversityDepartment of Mechanical Engineering, Brigham Young UniversityAbstract Obtaining microscopic structure-property relationships for grain boundaries is challenging due to their complex atomic structures. Recent efforts use machine learning to derive these relationships, but the way the atomic grain boundary structure is represented can have a significant impact on the predictions. Key steps for property prediction common to grain boundaries and other variable-sized atom clustered structures include: (1) describing the atomic structure as a feature matrix, (2) transforming the variable-sized feature matrix to a fixed length common to all structures, and (3) applying a machine learning algorithm to predict properties from the transformed matrices. We examine how these steps and different combinations of engineered features impact the accuracy of grain boundary energy predictions using a database of over 7000 grain boundaries. Additionally, we assess how different engineered features support interpretability, offering insights into the physics of the structure-property relationships.https://doi.org/10.1038/s41524-024-01509-x
spellingShingle C. Braxton Owens
Nithin Mathew
Tyce W. Olaveson
Jacob P. Tavenner
Edward M. Kober
Garritt J. Tucker
Gus L. W. Hart
Eric R. Homer
Feature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clusters
npj Computational Materials
title Feature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clusters
title_full Feature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clusters
title_fullStr Feature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clusters
title_full_unstemmed Feature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clusters
title_short Feature engineering descriptors, transforms, and machine learning for grain boundaries and variable-sized atom clusters
title_sort feature engineering descriptors transforms and machine learning for grain boundaries and variable sized atom clusters
url https://doi.org/10.1038/s41524-024-01509-x
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