Application of machine learning and genomics for orphan crop improvement

Abstract Orphan crops are important sources of nutrition in developing regions and many are tolerant to biotic and abiotic stressors; however, modern crop improvement technologies have not been widely applied to orphan crops due to the lack of resources available. There are orphan crop representativ...

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Main Authors: Tessa R. MacNish, Monica F. Danilevicz, Philipp E. Bayer, Mitchell S. Bestry, David Edwards
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-56330-x
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author Tessa R. MacNish
Monica F. Danilevicz
Philipp E. Bayer
Mitchell S. Bestry
David Edwards
author_facet Tessa R. MacNish
Monica F. Danilevicz
Philipp E. Bayer
Mitchell S. Bestry
David Edwards
author_sort Tessa R. MacNish
collection DOAJ
description Abstract Orphan crops are important sources of nutrition in developing regions and many are tolerant to biotic and abiotic stressors; however, modern crop improvement technologies have not been widely applied to orphan crops due to the lack of resources available. There are orphan crop representatives across major crop types and the conservation of genes between these related species can be used in crop improvement. Machine learning (ML) has emerged as a promising tool for crop improvement. Transferring knowledge from major crops to orphan crops and using machine learning to improve accuracy and efficiency can be used to improve orphan crops.
format Article
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institution Kabale University
issn 2041-1723
language English
publishDate 2025-01-01
publisher Nature Portfolio
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series Nature Communications
spelling doaj-art-bc807928e2954ff7b4e44ab21734b8fb2025-01-26T12:41:48ZengNature PortfolioNature Communications2041-17232025-01-0116111010.1038/s41467-025-56330-xApplication of machine learning and genomics for orphan crop improvementTessa R. MacNish0Monica F. Danilevicz1Philipp E. Bayer2Mitchell S. Bestry3David Edwards4School of Biological Sciences, The University of Western AustraliaSchool of Biological Sciences, The University of Western AustraliaCentre for Applied Bioinformatics, The University of Western AustraliaSchool of Biological Sciences, The University of Western AustraliaSchool of Biological Sciences, The University of Western AustraliaAbstract Orphan crops are important sources of nutrition in developing regions and many are tolerant to biotic and abiotic stressors; however, modern crop improvement technologies have not been widely applied to orphan crops due to the lack of resources available. There are orphan crop representatives across major crop types and the conservation of genes between these related species can be used in crop improvement. Machine learning (ML) has emerged as a promising tool for crop improvement. Transferring knowledge from major crops to orphan crops and using machine learning to improve accuracy and efficiency can be used to improve orphan crops.https://doi.org/10.1038/s41467-025-56330-x
spellingShingle Tessa R. MacNish
Monica F. Danilevicz
Philipp E. Bayer
Mitchell S. Bestry
David Edwards
Application of machine learning and genomics for orphan crop improvement
Nature Communications
title Application of machine learning and genomics for orphan crop improvement
title_full Application of machine learning and genomics for orphan crop improvement
title_fullStr Application of machine learning and genomics for orphan crop improvement
title_full_unstemmed Application of machine learning and genomics for orphan crop improvement
title_short Application of machine learning and genomics for orphan crop improvement
title_sort application of machine learning and genomics for orphan crop improvement
url https://doi.org/10.1038/s41467-025-56330-x
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