Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis

Abstract Under stress, bacteria display selective growth propensities on solid and liquid media. For Mycobacterium tuberculosis (Mtb), differentially culturable bacteria have been found in tuberculosis (TB) patient sputa. We hypothesized that antibiotic treatment can induce selective culturability i...

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Main Authors: Valerie F. A. March, Nino Maghradze, Kakha Mchedlishvili, Teona Avaliani, Rusudan Aspindzelashvili, Zaza Avaliani, Maia Kipiani, Nestani Tukvadze, Levan Jugheli, Selim Bouaouina, Anna Doetsch, Galo A. Goig, Sebastien Gagneux, Sonia Borrell
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Scientific Reports
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Online Access:https://doi.org/10.1038/s41598-024-85092-7
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author Valerie F. A. March
Nino Maghradze
Kakha Mchedlishvili
Teona Avaliani
Rusudan Aspindzelashvili
Zaza Avaliani
Maia Kipiani
Nestani Tukvadze
Levan Jugheli
Selim Bouaouina
Anna Doetsch
Galo A. Goig
Sebastien Gagneux
Sonia Borrell
author_facet Valerie F. A. March
Nino Maghradze
Kakha Mchedlishvili
Teona Avaliani
Rusudan Aspindzelashvili
Zaza Avaliani
Maia Kipiani
Nestani Tukvadze
Levan Jugheli
Selim Bouaouina
Anna Doetsch
Galo A. Goig
Sebastien Gagneux
Sonia Borrell
author_sort Valerie F. A. March
collection DOAJ
description Abstract Under stress, bacteria display selective growth propensities on solid and liquid media. For Mycobacterium tuberculosis (Mtb), differentially culturable bacteria have been found in tuberculosis (TB) patient sputa. We hypothesized that antibiotic treatment can induce selective culturability in Mtb. We investigated the effect of exposure to TB drugs on Mtb culturability using clinical samples from an ongoing TB patient cohort and by conducting several in vitro experiments with a diverse set of Mtb strains. In patients, serial sputa were more likely to generate Mtb-positive cultures in liquid as opposed to solid medium, with this liquid culture bias extending up to 5 months post diagnosis. Experimentally, there was a disparity between bacterial time to positivity (TTP) and colony forming units (CFUs) when Mtb was exposed to isoniazid (INH) and rifampicin (RIF) alone or in combination. Cultures recovered from RIF treatment yielded more CFUs on agar plates, but INH-treated cultures had a faster TTP in liquid. Follow up experiments using a fluorescently labelled laboratory strain of Mtb revealed that CFUs of INH-treated bacteria were too low, thus over-estimating the killing effect of the treatment. Here we provide evidence that drug exposure affects culturability on solid medium in diverse Mtb strains, which has implications for treatment monitoring and drug-pathogen interaction studies.
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spelling doaj-art-b9a731c24a0f4e7085eddaca931f01572025-02-02T12:17:14ZengNature PortfolioScientific Reports2045-23222025-01-011511810.1038/s41598-024-85092-7Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosisValerie F. A. March0Nino Maghradze1Kakha Mchedlishvili2Teona Avaliani3Rusudan Aspindzelashvili4Zaza Avaliani5Maia Kipiani6Nestani Tukvadze7Levan Jugheli8Selim Bouaouina9Anna Doetsch10Galo A. Goig11Sebastien Gagneux12Sonia Borrell13Swiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteNational Centre for Tuberculosis and Lung Diseases (NCTLD)National Centre for Tuberculosis and Lung Diseases (NCTLD)National Centre for Tuberculosis and Lung Diseases (NCTLD)National Centre for Tuberculosis and Lung Diseases (NCTLD)Swiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteSwiss Tropical and Public Health InstituteAbstract Under stress, bacteria display selective growth propensities on solid and liquid media. For Mycobacterium tuberculosis (Mtb), differentially culturable bacteria have been found in tuberculosis (TB) patient sputa. We hypothesized that antibiotic treatment can induce selective culturability in Mtb. We investigated the effect of exposure to TB drugs on Mtb culturability using clinical samples from an ongoing TB patient cohort and by conducting several in vitro experiments with a diverse set of Mtb strains. In patients, serial sputa were more likely to generate Mtb-positive cultures in liquid as opposed to solid medium, with this liquid culture bias extending up to 5 months post diagnosis. Experimentally, there was a disparity between bacterial time to positivity (TTP) and colony forming units (CFUs) when Mtb was exposed to isoniazid (INH) and rifampicin (RIF) alone or in combination. Cultures recovered from RIF treatment yielded more CFUs on agar plates, but INH-treated cultures had a faster TTP in liquid. Follow up experiments using a fluorescently labelled laboratory strain of Mtb revealed that CFUs of INH-treated bacteria were too low, thus over-estimating the killing effect of the treatment. Here we provide evidence that drug exposure affects culturability on solid medium in diverse Mtb strains, which has implications for treatment monitoring and drug-pathogen interaction studies.https://doi.org/10.1038/s41598-024-85092-7Mycobacterium tuberculosisCulturabilityViable but non culturable (VBNC)AntibioticsIsoniazidRifampicin
spellingShingle Valerie F. A. March
Nino Maghradze
Kakha Mchedlishvili
Teona Avaliani
Rusudan Aspindzelashvili
Zaza Avaliani
Maia Kipiani
Nestani Tukvadze
Levan Jugheli
Selim Bouaouina
Anna Doetsch
Galo A. Goig
Sebastien Gagneux
Sonia Borrell
Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis
Scientific Reports
Mycobacterium tuberculosis
Culturability
Viable but non culturable (VBNC)
Antibiotics
Isoniazid
Rifampicin
title Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis
title_full Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis
title_fullStr Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis
title_full_unstemmed Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis
title_short Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis
title_sort drug induced differential culturability in diverse strains of mycobacterium tuberculosis
topic Mycobacterium tuberculosis
Culturability
Viable but non culturable (VBNC)
Antibiotics
Isoniazid
Rifampicin
url https://doi.org/10.1038/s41598-024-85092-7
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