Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction network

Dynamical aspects of the asymmetric cellular automata were in-vestigated to consider the signaling processes in biological systems. As a meta-model of the cascade of feed-forward loop type network motifs in biologicalreaction networks, we consider the one dimensional asymmetric cellular au-tomata wh...

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Main Author: Akinori Awazu
Format: Article
Language:English
Published: AIMS Press 2008-05-01
Series:Mathematical Biosciences and Engineering
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Online Access:https://www.aimspress.com/article/doi/10.3934/mbe.2008.5.419
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author Akinori Awazu
author_facet Akinori Awazu
author_sort Akinori Awazu
collection DOAJ
description Dynamical aspects of the asymmetric cellular automata were in-vestigated to consider the signaling processes in biological systems. As a meta-model of the cascade of feed-forward loop type network motifs in biologicalreaction networks, we consider the one dimensional asymmetric cellular au-tomata where the state of each cell is controlled by a trio of cells, the cell itself,the nearest upstream cell and the next nearest upstream cell. Through thesystematic simulations, some novel input-dependent wave propagations werefound in certain asymmetric CA, which may be useful for the signaling pro-cesses like the distinction, the filtering and the memory of external stimuli.
format Article
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institution Kabale University
issn 1551-0018
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series Mathematical Biosciences and Engineering
spelling doaj-art-b6675a007139445c99cca1dd4b239fce2025-01-24T01:58:23ZengAIMS PressMathematical Biosciences and Engineering1551-00182008-05-015341942710.3934/mbe.2008.5.419Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction networkAkinori Awazu0Department of Mathematical and Life Sciences, Hiroshima University, Kagami-yama 1-3-1, Higashi-Hiroshima 739-8526Dynamical aspects of the asymmetric cellular automata were in-vestigated to consider the signaling processes in biological systems. As a meta-model of the cascade of feed-forward loop type network motifs in biologicalreaction networks, we consider the one dimensional asymmetric cellular au-tomata where the state of each cell is controlled by a trio of cells, the cell itself,the nearest upstream cell and the next nearest upstream cell. Through thesystematic simulations, some novel input-dependent wave propagations werefound in certain asymmetric CA, which may be useful for the signaling pro-cesses like the distinction, the filtering and the memory of external stimuli.https://www.aimspress.com/article/doi/10.3934/mbe.2008.5.419dynamical systems inbiologycellular automatafilteriongetc.)applications (signal detection
spellingShingle Akinori Awazu
Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction network
Mathematical Biosciences and Engineering
dynamical systems inbiology
cellular automata
filteriong
etc.)
applications (signal detection
title Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction network
title_full Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction network
title_fullStr Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction network
title_full_unstemmed Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction network
title_short Input-dependent wave propagations in asymmetric cellular automata: Possible behaviors of feed-forward loop in biological reaction network
title_sort input dependent wave propagations in asymmetric cellular automata possible behaviors of feed forward loop in biological reaction network
topic dynamical systems inbiology
cellular automata
filteriong
etc.)
applications (signal detection
url https://www.aimspress.com/article/doi/10.3934/mbe.2008.5.419
work_keys_str_mv AT akinoriawazu inputdependentwavepropagationsinasymmetriccellularautomatapossiblebehaviorsoffeedforwardloopinbiologicalreactionnetwork