Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical study

BackgroundThe interaction between the host and microbiota is influenced by host circadian rhythm. However, it is unknown what the changes of gut microbiota and metabolites.MethodsWe conducted a cross-sectional study (n=72) in which participants’ fecal DNA was detected by macrogenomic sequencing anal...

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Main Authors: Yuting Tian, Rong Zhao, Shili Xiao, Lu Chen, Yi Cheng, Wei Meng, Zongyuan Tang, Yi Cai, Zhifeng Xiao, Ailin Yi, Minjia Chen, Xuefei Zhao, Guangcong Ruan, Yanling Wei
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-03-01
Series:Frontiers in Cellular and Infection Microbiology
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Online Access:https://www.frontiersin.org/articles/10.3389/fcimb.2025.1524987/full
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author Yuting Tian
Rong Zhao
Shili Xiao
Lu Chen
Yi Cheng
Wei Meng
Zongyuan Tang
Yi Cai
Zhifeng Xiao
Ailin Yi
Minjia Chen
Xuefei Zhao
Guangcong Ruan
Yanling Wei
author_facet Yuting Tian
Rong Zhao
Shili Xiao
Lu Chen
Yi Cheng
Wei Meng
Zongyuan Tang
Yi Cai
Zhifeng Xiao
Ailin Yi
Minjia Chen
Xuefei Zhao
Guangcong Ruan
Yanling Wei
author_sort Yuting Tian
collection DOAJ
description BackgroundThe interaction between the host and microbiota is influenced by host circadian rhythm. However, it is unknown what the changes of gut microbiota and metabolites.MethodsWe conducted a cross-sectional study (n=72) in which participants’ fecal DNA was detected by macrogenomic sequencing analysis. The feces, urine and blood were analyzed by widely targeted metabolomics analysis.ResultsPearson correlation analysis showed that most of the clinical symptoms of people with circadian rhythm disorders were moderately positively correlated with gastrointestinal symptoms. By distilling the results of multinomic analysis, we reported a variety of different species (19 species in the gut) and metabolites. In our results, the correlation of multiomics is mostly concentrated in Lachnospiraceae bacterium and Streptococcus mitis oralis pneumoniae. Bile acid-related metabolites are the most significant metabolites associated with these species.DiscussionOur study demonstrates the severity of clinical manifestations caused by circadian rhythm disorder is closely related to microbiota and metabolism. In the future, personalized interventions targeting specific microbial species or metabolites may help alleviate the physical and psychological discomfort induced by circadian rhythm disturbances.
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spelling doaj-art-abbcc5db2cee4e71bae6ea36628e1d592025-08-20T02:10:42ZengFrontiers Media S.A.Frontiers in Cellular and Infection Microbiology2235-29882025-03-011510.3389/fcimb.2025.15249871524987Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical studyYuting TianRong ZhaoShili XiaoLu ChenYi ChengWei MengZongyuan TangYi CaiZhifeng XiaoAilin YiMinjia ChenXuefei ZhaoGuangcong RuanYanling WeiBackgroundThe interaction between the host and microbiota is influenced by host circadian rhythm. However, it is unknown what the changes of gut microbiota and metabolites.MethodsWe conducted a cross-sectional study (n=72) in which participants’ fecal DNA was detected by macrogenomic sequencing analysis. The feces, urine and blood were analyzed by widely targeted metabolomics analysis.ResultsPearson correlation analysis showed that most of the clinical symptoms of people with circadian rhythm disorders were moderately positively correlated with gastrointestinal symptoms. By distilling the results of multinomic analysis, we reported a variety of different species (19 species in the gut) and metabolites. In our results, the correlation of multiomics is mostly concentrated in Lachnospiraceae bacterium and Streptococcus mitis oralis pneumoniae. Bile acid-related metabolites are the most significant metabolites associated with these species.DiscussionOur study demonstrates the severity of clinical manifestations caused by circadian rhythm disorder is closely related to microbiota and metabolism. In the future, personalized interventions targeting specific microbial species or metabolites may help alleviate the physical and psychological discomfort induced by circadian rhythm disturbances.https://www.frontiersin.org/articles/10.3389/fcimb.2025.1524987/fullgut microbiotacircadian rhythm disordermetabolitescross-sectional studymultiomics analysis
spellingShingle Yuting Tian
Rong Zhao
Shili Xiao
Lu Chen
Yi Cheng
Wei Meng
Zongyuan Tang
Yi Cai
Zhifeng Xiao
Ailin Yi
Minjia Chen
Xuefei Zhao
Guangcong Ruan
Yanling Wei
Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical study
Frontiers in Cellular and Infection Microbiology
gut microbiota
circadian rhythm disorder
metabolites
cross-sectional study
multiomics analysis
title Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical study
title_full Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical study
title_fullStr Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical study
title_full_unstemmed Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical study
title_short Multi-omics assessment of gut microbiota in circadian rhythm disorders: a cross-sectional clinical study
title_sort multi omics assessment of gut microbiota in circadian rhythm disorders a cross sectional clinical study
topic gut microbiota
circadian rhythm disorder
metabolites
cross-sectional study
multiomics analysis
url https://www.frontiersin.org/articles/10.3389/fcimb.2025.1524987/full
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