Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data

ABSTRACT Management strategies, such as assisted gene flow, can increase resilience to climate change in tree populations. Knowledge of evolutionary history and genetic structure of species are needed to assess the risks and benefits of different strategies. Quercus tomentella, or Island Oak, is a r...

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Main Authors: Alayna Mead, Sorel Fitz‐Gibbon, John Knapp, Victoria L. Sork
Format: Article
Language:English
Published: Wiley 2024-12-01
Series:Evolutionary Applications
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Online Access:https://doi.org/10.1111/eva.70057
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author Alayna Mead
Sorel Fitz‐Gibbon
John Knapp
Victoria L. Sork
author_facet Alayna Mead
Sorel Fitz‐Gibbon
John Knapp
Victoria L. Sork
author_sort Alayna Mead
collection DOAJ
description ABSTRACT Management strategies, such as assisted gene flow, can increase resilience to climate change in tree populations. Knowledge of evolutionary history and genetic structure of species are needed to assess the risks and benefits of different strategies. Quercus tomentella, or Island Oak, is a rare oak restricted to six Channel Islands in California, United States, and Baja California, Mexico. Previous work has shown that Island Oaks on each island are genetically differentiated, but it is unclear whether assisted gene flow could enable populations to tolerate future climates. We performed whole‐genome sequencing on Island Oak individuals and Q. chrysolepis, a closely related species that hybridizes with Island Oak (127 total), to characterize genetic structure and introgression across its range and assess the relationship between genomic variation and climate. We introduce and assess three potential management strategies with different trade‐offs between conserving historic genetic structure and enabling populations to survive changing climates: the status quo approach; ecosystem preservation approach, which conserves the trees and their associated biodiversity; and species preservation approach, which conserves the species. We compare the impact of these approaches on predicted maladaptation to climate using Gradient Forest. We also introduce a climate suitability index to identify optimal pairs of seed sources and planting sites for approaches involving assisted gene flow. We found one island (Santa Rosa) that could benefit from the ecosystem preservation approach and also serve as a species preservation site. Overall, we find that both the ecosystem and species preservation approaches will do better than the status quo approach. If preserving Island Oak ecosystems is the goal, assisted dispersal into multiple sites could produce adapted populations. If the goal is to preserve a species, the Santa Rosa population would be suitable. This case study both illustrates viable conservation strategies for Island Oak and introduces a framework for tree conservation.
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spelling doaj-art-a9ccf3fd73584804902cc954ed44ba212025-01-29T07:57:46ZengWileyEvolutionary Applications1752-45712024-12-011712n/an/a10.1111/eva.70057Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic DataAlayna Mead0Sorel Fitz‐Gibbon1John Knapp2Victoria L. Sork3Department of Ecology and Evolutionary Biology University of California, Los Angeles Los Angeles California USADepartment of Ecology and Evolutionary Biology University of California, Los Angeles Los Angeles California USAThe Nature Conservancy California Chapter San Francisco California USADepartment of Ecology and Evolutionary Biology University of California, Los Angeles Los Angeles California USAABSTRACT Management strategies, such as assisted gene flow, can increase resilience to climate change in tree populations. Knowledge of evolutionary history and genetic structure of species are needed to assess the risks and benefits of different strategies. Quercus tomentella, or Island Oak, is a rare oak restricted to six Channel Islands in California, United States, and Baja California, Mexico. Previous work has shown that Island Oaks on each island are genetically differentiated, but it is unclear whether assisted gene flow could enable populations to tolerate future climates. We performed whole‐genome sequencing on Island Oak individuals and Q. chrysolepis, a closely related species that hybridizes with Island Oak (127 total), to characterize genetic structure and introgression across its range and assess the relationship between genomic variation and climate. We introduce and assess three potential management strategies with different trade‐offs between conserving historic genetic structure and enabling populations to survive changing climates: the status quo approach; ecosystem preservation approach, which conserves the trees and their associated biodiversity; and species preservation approach, which conserves the species. We compare the impact of these approaches on predicted maladaptation to climate using Gradient Forest. We also introduce a climate suitability index to identify optimal pairs of seed sources and planting sites for approaches involving assisted gene flow. We found one island (Santa Rosa) that could benefit from the ecosystem preservation approach and also serve as a species preservation site. Overall, we find that both the ecosystem and species preservation approaches will do better than the status quo approach. If preserving Island Oak ecosystems is the goal, assisted dispersal into multiple sites could produce adapted populations. If the goal is to preserve a species, the Santa Rosa population would be suitable. This case study both illustrates viable conservation strategies for Island Oak and introduces a framework for tree conservation.https://doi.org/10.1111/eva.70057California Channel Islandsclimate suitabilityconservation geneticsgenomic offsetGuadalupe IslandQuercus chrysolepis
spellingShingle Alayna Mead
Sorel Fitz‐Gibbon
John Knapp
Victoria L. Sork
Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data
Evolutionary Applications
California Channel Islands
climate suitability
conservation genetics
genomic offset
Guadalupe Island
Quercus chrysolepis
title Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data
title_full Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data
title_fullStr Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data
title_full_unstemmed Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data
title_short Comparison of Conservation Strategies for California Channel Island Oak (Quercus tomentella) Using Climate Suitability Predicted From Genomic Data
title_sort comparison of conservation strategies for california channel island oak quercus tomentella using climate suitability predicted from genomic data
topic California Channel Islands
climate suitability
conservation genetics
genomic offset
Guadalupe Island
Quercus chrysolepis
url https://doi.org/10.1111/eva.70057
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