Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences

Abstract The genus Streptococcus is highly diverse and a core member of the primate oral microbiome. Streptococcus species are grouped into at least eight phylogenetically-supported clades, five of which are found almost exclusively in the oral cavity. We explored the dominant Streptococcus phylogen...

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Main Authors: Irina M. Velsko, Christina Warinner
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:npj Biofilms and Microbiomes
Online Access:https://doi.org/10.1038/s41522-024-00642-1
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author Irina M. Velsko
Christina Warinner
author_facet Irina M. Velsko
Christina Warinner
author_sort Irina M. Velsko
collection DOAJ
description Abstract The genus Streptococcus is highly diverse and a core member of the primate oral microbiome. Streptococcus species are grouped into at least eight phylogenetically-supported clades, five of which are found almost exclusively in the oral cavity. We explored the dominant Streptococcus phylogenetic clades in samples from multiple oral sites and from ancient and modern-day humans and non-human primates and found that clade dominance is conserved across human oral sites, with most Streptococcus reads assigned to species falling in the Sanguinis or Mitis clades. However, minor differences in the presence and abundance of individual species within each clade differentiated human lifestyles, with loss of S. sinensis appearing to correlate with toothbrushing. Of the non-human primates, only baboons show clade abundance patterns similar to humans, suggesting that a habitat and diet similar to that of early humans may favor the growth of Sanguinis and Mitis clade species.
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spelling doaj-art-97655ddef5fa403583d281ddec8a0f302025-01-19T12:12:16ZengNature Portfolionpj Biofilms and Microbiomes2055-50082025-01-0111111310.1038/s41522-024-00642-1Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differencesIrina M. Velsko0Christina Warinner1Department of Archaeogenetics, Max Planck Institute for Evolutionary AnthropologyDepartment of Archaeogenetics, Max Planck Institute for Evolutionary AnthropologyAbstract The genus Streptococcus is highly diverse and a core member of the primate oral microbiome. Streptococcus species are grouped into at least eight phylogenetically-supported clades, five of which are found almost exclusively in the oral cavity. We explored the dominant Streptococcus phylogenetic clades in samples from multiple oral sites and from ancient and modern-day humans and non-human primates and found that clade dominance is conserved across human oral sites, with most Streptococcus reads assigned to species falling in the Sanguinis or Mitis clades. However, minor differences in the presence and abundance of individual species within each clade differentiated human lifestyles, with loss of S. sinensis appearing to correlate with toothbrushing. Of the non-human primates, only baboons show clade abundance patterns similar to humans, suggesting that a habitat and diet similar to that of early humans may favor the growth of Sanguinis and Mitis clade species.https://doi.org/10.1038/s41522-024-00642-1
spellingShingle Irina M. Velsko
Christina Warinner
Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences
npj Biofilms and Microbiomes
title Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences
title_full Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences
title_fullStr Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences
title_full_unstemmed Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences
title_short Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences
title_sort streptococcus abundance and oral site tropism in humans and non human primates reflects host and lifestyle differences
url https://doi.org/10.1038/s41522-024-00642-1
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