GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION
The paper is devoted to analysis of genome variability of African swine fever (ASF) virus isolates recovered in the Russian Federation territory. Complete nucleotide sequences of the following ASF virus isolate genomes were obtained by pyrosequencing: Kashino 04/13, Odintsovo 02/14 and Karamzino 02/...
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Da Vinci Media
2018-04-01
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| Series: | Ветеринария сегодня |
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| Online Access: | https://veterinary.arriah.ru/jour/article/view/221 |
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| author | A. A. Varentsova A. A. Yelsukova N. G. Zinyakov A. S. Igolkin N. N. Vlasova |
| author_facet | A. A. Varentsova A. A. Yelsukova N. G. Zinyakov A. S. Igolkin N. N. Vlasova |
| author_sort | A. A. Varentsova |
| collection | DOAJ |
| description | The paper is devoted to analysis of genome variability of African swine fever (ASF) virus isolates recovered in the Russian Federation territory. Complete nucleotide sequences of the following ASF virus isolate genomes were obtained by pyrosequencing: Kashino 04/13, Odintsovo 02/14 and Karamzino 02/13. Multiple single insertions and deletions as well as distinctly localized two tandem repeats were found by comparative analysis of genomes of the said isolates and Georgia 2007/1 isolate. Notably that 17-nucleotide tandem repeat was detected in 9R/10R intergenic region of MGF505 multigene family in genomes of Shikhobalovo 10/13 and Karamzino 02/13 isolates for the first time. |
| format | Article |
| id | doaj-art-9111938047da42ad8c34d175caebb5ed |
| institution | Kabale University |
| issn | 2304-196X 2658-6959 |
| language | English |
| publishDate | 2018-04-01 |
| publisher | Da Vinci Media |
| record_format | Article |
| series | Ветеринария сегодня |
| spelling | doaj-art-9111938047da42ad8c34d175caebb5ed2025-02-06T09:52:05ZengDa Vinci MediaВетеринария сегодня2304-196X2658-69592018-04-01045760221GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATIONA. A. Varentsova0A. A. Yelsukova1N. G. Zinyakov2A. S. Igolkin3N. N. Vlasova4FGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirThe paper is devoted to analysis of genome variability of African swine fever (ASF) virus isolates recovered in the Russian Federation territory. Complete nucleotide sequences of the following ASF virus isolate genomes were obtained by pyrosequencing: Kashino 04/13, Odintsovo 02/14 and Karamzino 02/13. Multiple single insertions and deletions as well as distinctly localized two tandem repeats were found by comparative analysis of genomes of the said isolates and Georgia 2007/1 isolate. Notably that 17-nucleotide tandem repeat was detected in 9R/10R intergenic region of MGF505 multigene family in genomes of Shikhobalovo 10/13 and Karamzino 02/13 isolates for the first time.https://veterinary.arriah.ru/jour/article/view/221африканская чума свинейполногеномное секвенированиеанализ геноматандемный повторделеции и вставкиafrican swine fever (asf)whole-genome sequencinggenome analysistandem repeatdeletions and insertions |
| spellingShingle | A. A. Varentsova A. A. Yelsukova N. G. Zinyakov A. S. Igolkin N. N. Vlasova GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION Ветеринария сегодня африканская чума свиней полногеномное секвенирование анализ генома тандемный повтор делеции и вставки african swine fever (asf) whole-genome sequencing genome analysis tandem repeat deletions and insertions |
| title | GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION |
| title_full | GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION |
| title_fullStr | GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION |
| title_full_unstemmed | GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION |
| title_short | GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION |
| title_sort | genomic aberrations in dna of african swine fever virus circulating in the territory of the russian federation |
| topic | африканская чума свиней полногеномное секвенирование анализ генома тандемный повтор делеции и вставки african swine fever (asf) whole-genome sequencing genome analysis tandem repeat deletions and insertions |
| url | https://veterinary.arriah.ru/jour/article/view/221 |
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