Synthesis and structural characterization of s-triazine derivatives and their photophysical properties

In the current work, crystals of four s-triazine analogues were examined by single X-ray diffraction study. Intermolecular N7—H7…O3 hydrogen bonding patterns in 1 form chain-like supramolecular structures that extends along the crystallographic b axis. These chains are further linked by intermolecul...

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Main Authors: Hessa H. Al-Rasheed, Sizwe J. Zamisa, Ihab Shawish, Assem Barakat, Ayman El-Faham, Beatriz G. de la Torre, Fernando Albericio, Anamika Sharma
Format: Article
Language:English
Published: Elsevier 2025-01-01
Series:Results in Chemistry
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Online Access:http://www.sciencedirect.com/science/article/pii/S2211715624006623
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author Hessa H. Al-Rasheed
Sizwe J. Zamisa
Ihab Shawish
Assem Barakat
Ayman El-Faham
Beatriz G. de la Torre
Fernando Albericio
Anamika Sharma
author_facet Hessa H. Al-Rasheed
Sizwe J. Zamisa
Ihab Shawish
Assem Barakat
Ayman El-Faham
Beatriz G. de la Torre
Fernando Albericio
Anamika Sharma
author_sort Hessa H. Al-Rasheed
collection DOAJ
description In the current work, crystals of four s-triazine analogues were examined by single X-ray diffraction study. Intermolecular N7—H7…O3 hydrogen bonding patterns in 1 form chain-like supramolecular structures that extends along the crystallographic b axis. These chains are further linked by intermolecular πring2… πring3 interactions that propagate diagonally with respect to the crystallographic ab plane; thus, forming a two-dimensional supramolecular structure. In 2 and 3, intermolecular N—H…O were observed between the H7 atom of the amine group and O4 atom of the methanol molecule. In 4, the same intramolecular C—H…N hydrogen bonds mentioned in 2 and 3 were found. Hirshfeld surface explained the O…H and N…H contacts contributing towards hydrogen bonding. The dihedral angles showed slight deviation, and this was related to the natural atomic charges present on the atoms in the molecule. Band gap was found to be lowest in case of 2 (3.95 eV) and highest in case of 1 (4.57 eV) depicting its highest and lowest reactivity, respectively. UV–vis and fluorescence reveal largest Stokes shift in case of 2 and lowest in case of 4.
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spelling doaj-art-8c17254f4c514ff797cc7e8d7c8d7fe12025-01-29T05:00:43ZengElsevierResults in Chemistry2211-71562025-01-0113101966Synthesis and structural characterization of s-triazine derivatives and their photophysical propertiesHessa H. Al-Rasheed0Sizwe J. Zamisa1Ihab Shawish2Assem Barakat3Ayman El-Faham4Beatriz G. de la Torre5Fernando Albericio6Anamika Sharma7Department of Chemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi ArabiaSchool of Chemistry and Physics, University of KwaZulu-Natal, Private Bag X54001, Durban, 4000, South AfricaDepartment of Maths and Sciences, College of Humanities and Sciences, Prince Sultan University, P.O. Box 66833, Riyadh 11586, Saudi ArabiaDepartment of Chemistry, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi ArabiaDepartment of Basic Medical Sciences, College of Medicine, Dar Al Uloom University, P. O. Box 45142 Riyadh 11512, Saudi Arabia; Corresponding authors.Peptide Science Laboratory, School of Chemistry and Physics, University of KwaZulu-Natal, Durban 4001, South Africa; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, College of Health Sciences, University of KwaZulu-Natal, Durban 4041, South AfricaPeptide Science Laboratory, School of Chemistry and Physics, University of KwaZulu-Natal, Durban 4001, South Africa; CIBER-BBN (Networking Centre on Bioengineering, Biomaterials and Nanomedicine) and Department of Organic Chemistry, University of Barcelona, 08028 Barcelona, SpainPeptide Science Laboratory, School of Chemistry and Physics, University of KwaZulu-Natal, Durban 4001, South Africa; Corresponding authors.In the current work, crystals of four s-triazine analogues were examined by single X-ray diffraction study. Intermolecular N7—H7…O3 hydrogen bonding patterns in 1 form chain-like supramolecular structures that extends along the crystallographic b axis. These chains are further linked by intermolecular πring2… πring3 interactions that propagate diagonally with respect to the crystallographic ab plane; thus, forming a two-dimensional supramolecular structure. In 2 and 3, intermolecular N—H…O were observed between the H7 atom of the amine group and O4 atom of the methanol molecule. In 4, the same intramolecular C—H…N hydrogen bonds mentioned in 2 and 3 were found. Hirshfeld surface explained the O…H and N…H contacts contributing towards hydrogen bonding. The dihedral angles showed slight deviation, and this was related to the natural atomic charges present on the atoms in the molecule. Band gap was found to be lowest in case of 2 (3.95 eV) and highest in case of 1 (4.57 eV) depicting its highest and lowest reactivity, respectively. UV–vis and fluorescence reveal largest Stokes shift in case of 2 and lowest in case of 4.http://www.sciencedirect.com/science/article/pii/S2211715624006623CrystalsDensity Functional TheoryHirshfeld Surface AnalysisAbsorption spectraEmission Spectra
spellingShingle Hessa H. Al-Rasheed
Sizwe J. Zamisa
Ihab Shawish
Assem Barakat
Ayman El-Faham
Beatriz G. de la Torre
Fernando Albericio
Anamika Sharma
Synthesis and structural characterization of s-triazine derivatives and their photophysical properties
Results in Chemistry
Crystals
Density Functional Theory
Hirshfeld Surface Analysis
Absorption spectra
Emission Spectra
title Synthesis and structural characterization of s-triazine derivatives and their photophysical properties
title_full Synthesis and structural characterization of s-triazine derivatives and their photophysical properties
title_fullStr Synthesis and structural characterization of s-triazine derivatives and their photophysical properties
title_full_unstemmed Synthesis and structural characterization of s-triazine derivatives and their photophysical properties
title_short Synthesis and structural characterization of s-triazine derivatives and their photophysical properties
title_sort synthesis and structural characterization of s triazine derivatives and their photophysical properties
topic Crystals
Density Functional Theory
Hirshfeld Surface Analysis
Absorption spectra
Emission Spectra
url http://www.sciencedirect.com/science/article/pii/S2211715624006623
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