Genetic Diversity on Farm in Japanese Paper Mulberry
ABSTRACT Paper mulberry is a fiber resource for paper making. Washi, a traditional paper in Japan, has been produced from Broussonetia × kazinoki, a hybrid between B. monoica and B. papyrifera. Elite strains have been vegetatively propagated and distributed within Japan. In this study, these three s...
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| Format: | Article |
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Wiley
2025-01-01
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| Series: | Ecology and Evolution |
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| Online Access: | https://doi.org/10.1002/ece3.70828 |
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| author | Dinh Thi Lam Katsunori Tanaka Akihiko Takashima Ayako Shibutani Ryuji Ishikawa |
| author_facet | Dinh Thi Lam Katsunori Tanaka Akihiko Takashima Ayako Shibutani Ryuji Ishikawa |
| author_sort | Dinh Thi Lam |
| collection | DOAJ |
| description | ABSTRACT Paper mulberry is a fiber resource for paper making. Washi, a traditional paper in Japan, has been produced from Broussonetia × kazinoki, a hybrid between B. monoica and B. papyrifera. Elite strains have been vegetatively propagated and distributed within Japan. In this study, these three strains' complete chloroplast (cp) genomes were reconstructed as pseudomolecules consisting of 160,861, 160,868, and 160,878 bp, respectively. They were compared with other database strains to detect insertion/deletion (INDEL) polymorphisms. In total, 25 INDELs were identified in these cp genomes. ISSR‐based MIG‐seq polymorphisms were applied to determine whether varieties or regional groups can be discriminated. Although various types of cultivars exhibiting different appearances are hard to discriminate, principal component analysis (PCA) distinguished two major groups. Maternal lineages reflecting the diverse origins of Japanese paper mulberry were determined using hypervariable maternal markers. An NGS‐oriented nuclear marker system revealed the heterogeneous nature of domesticated paper mulberry, reflecting the complex origins of Japanese B. × kazinoki. |
| format | Article |
| id | doaj-art-7c189315aa9f470b876111a4909c5d3d |
| institution | Kabale University |
| issn | 2045-7758 |
| language | English |
| publishDate | 2025-01-01 |
| publisher | Wiley |
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| series | Ecology and Evolution |
| spelling | doaj-art-7c189315aa9f470b876111a4909c5d3d2025-01-29T05:08:41ZengWileyEcology and Evolution2045-77582025-01-01151n/an/a10.1002/ece3.70828Genetic Diversity on Farm in Japanese Paper MulberryDinh Thi Lam0Katsunori Tanaka1Akihiko Takashima2Ayako Shibutani3Ryuji Ishikawa4Faculty of Agriculture and Life Science, Hirosaki University Hirosaki Aomori JapanFaculty of Agriculture and Life Science, Hirosaki University Hirosaki Aomori JapanHistoriographical Institute The University of Tokyo Bunkyo‐ku Tokyo JapanHistoriographical Institute The University of Tokyo Bunkyo‐ku Tokyo JapanFaculty of Agriculture and Life Science, Hirosaki University Hirosaki Aomori JapanABSTRACT Paper mulberry is a fiber resource for paper making. Washi, a traditional paper in Japan, has been produced from Broussonetia × kazinoki, a hybrid between B. monoica and B. papyrifera. Elite strains have been vegetatively propagated and distributed within Japan. In this study, these three strains' complete chloroplast (cp) genomes were reconstructed as pseudomolecules consisting of 160,861, 160,868, and 160,878 bp, respectively. They were compared with other database strains to detect insertion/deletion (INDEL) polymorphisms. In total, 25 INDELs were identified in these cp genomes. ISSR‐based MIG‐seq polymorphisms were applied to determine whether varieties or regional groups can be discriminated. Although various types of cultivars exhibiting different appearances are hard to discriminate, principal component analysis (PCA) distinguished two major groups. Maternal lineages reflecting the diverse origins of Japanese paper mulberry were determined using hypervariable maternal markers. An NGS‐oriented nuclear marker system revealed the heterogeneous nature of domesticated paper mulberry, reflecting the complex origins of Japanese B. × kazinoki.https://doi.org/10.1002/ece3.70828Broussonetiachloroplast genomeMIG‐seqpaper mulberry |
| spellingShingle | Dinh Thi Lam Katsunori Tanaka Akihiko Takashima Ayako Shibutani Ryuji Ishikawa Genetic Diversity on Farm in Japanese Paper Mulberry Ecology and Evolution Broussonetia chloroplast genome MIG‐seq paper mulberry |
| title | Genetic Diversity on Farm in Japanese Paper Mulberry |
| title_full | Genetic Diversity on Farm in Japanese Paper Mulberry |
| title_fullStr | Genetic Diversity on Farm in Japanese Paper Mulberry |
| title_full_unstemmed | Genetic Diversity on Farm in Japanese Paper Mulberry |
| title_short | Genetic Diversity on Farm in Japanese Paper Mulberry |
| title_sort | genetic diversity on farm in japanese paper mulberry |
| topic | Broussonetia chloroplast genome MIG‐seq paper mulberry |
| url | https://doi.org/10.1002/ece3.70828 |
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