Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics Profiling

Palbociclib is a cyclin-dependent kinase 4/6 inhibitor and a commonly used antitumor drug. Many cancers are susceptible to palbociclib resistance, however, the underlying metabolism mechanism and extent of resistance to palbociclib are unknown. In this study, LC-MS metabolomics was used to investiga...

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Main Authors: Lulu Yang, Yajun Yue, Zhendong Wang, You Jiang, Zhichao Xue, Yongzhuo Zhang
Format: Article
Language:English
Published: MDPI AG 2025-01-01
Series:Current Issues in Molecular Biology
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Online Access:https://www.mdpi.com/1467-3045/47/1/24
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author Lulu Yang
Yajun Yue
Zhendong Wang
You Jiang
Zhichao Xue
Yongzhuo Zhang
author_facet Lulu Yang
Yajun Yue
Zhendong Wang
You Jiang
Zhichao Xue
Yongzhuo Zhang
author_sort Lulu Yang
collection DOAJ
description Palbociclib is a cyclin-dependent kinase 4/6 inhibitor and a commonly used antitumor drug. Many cancers are susceptible to palbociclib resistance, however, the underlying metabolism mechanism and extent of resistance to palbociclib are unknown. In this study, LC-MS metabolomics was used to investigate the metabolite changes of colorectal cancer SW620 cells that were resistant to palbociclib. The study indicated that there were 76 metabolite expression differences between SW620 cells with palbociclib resistance and the parental SW620 cells involving amino acids, glutathione, ABC transporters, and so on. MetaboAnalyst 6.0 metabolic pathway analysis showed that arginine synthesis, β-alanine metabolism, and purine metabolism were disrupted. These results may provide potential clues to the metabolism mechanism of drug resistance in cancer cells that are resistant to palbociclib. Our study has the potential to contribute to the study of anti-palbociclib resistance.
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issn 1467-3037
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publishDate 2025-01-01
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series Current Issues in Molecular Biology
spelling doaj-art-7ba16010201940ff8805dbd70aa7a4b02025-01-24T13:27:26ZengMDPI AGCurrent Issues in Molecular Biology1467-30371467-30452025-01-014712410.3390/cimb47010024Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics ProfilingLulu Yang0Yajun Yue1Zhendong Wang2You Jiang3Zhichao Xue4Yongzhuo Zhang5Technology Innovation Center of Mass Spectrometry for State Market Regulation, Center for Advanced Measurement Science, National Institute of Metrology, Beijing 100029, ChinaGeneral Management Department of Laboratory Base, National Institute of Metrology, Beijing 100029, ChinaCenter for Advanced Measurement Science, National Institute of Metrology, Beijing 100029, ChinaTechnology Innovation Center of Mass Spectrometry for State Market Regulation, Center for Advanced Measurement Science, National Institute of Metrology, Beijing 100029, ChinaTechnology Innovation Center of Mass Spectrometry for State Market Regulation, Center for Advanced Measurement Science, National Institute of Metrology, Beijing 100029, ChinaCenter for Advanced Measurement Science, National Institute of Metrology, Beijing 100029, ChinaPalbociclib is a cyclin-dependent kinase 4/6 inhibitor and a commonly used antitumor drug. Many cancers are susceptible to palbociclib resistance, however, the underlying metabolism mechanism and extent of resistance to palbociclib are unknown. In this study, LC-MS metabolomics was used to investigate the metabolite changes of colorectal cancer SW620 cells that were resistant to palbociclib. The study indicated that there were 76 metabolite expression differences between SW620 cells with palbociclib resistance and the parental SW620 cells involving amino acids, glutathione, ABC transporters, and so on. MetaboAnalyst 6.0 metabolic pathway analysis showed that arginine synthesis, β-alanine metabolism, and purine metabolism were disrupted. These results may provide potential clues to the metabolism mechanism of drug resistance in cancer cells that are resistant to palbociclib. Our study has the potential to contribute to the study of anti-palbociclib resistance.https://www.mdpi.com/1467-3045/47/1/24LC-MSSW620 cellsmetabolomicsdrug resistancecancer biology
spellingShingle Lulu Yang
Yajun Yue
Zhendong Wang
You Jiang
Zhichao Xue
Yongzhuo Zhang
Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics Profiling
Current Issues in Molecular Biology
LC-MS
SW620 cells
metabolomics
drug resistance
cancer biology
title Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics Profiling
title_full Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics Profiling
title_fullStr Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics Profiling
title_full_unstemmed Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics Profiling
title_short Elucidating the Mechanisms of Acquired Palbociclib Resistance via Comprehensive Metabolomics Profiling
title_sort elucidating the mechanisms of acquired palbociclib resistance via comprehensive metabolomics profiling
topic LC-MS
SW620 cells
metabolomics
drug resistance
cancer biology
url https://www.mdpi.com/1467-3045/47/1/24
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AT zhendongwang elucidatingthemechanismsofacquiredpalbociclibresistanceviacomprehensivemetabolomicsprofiling
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