Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing
Intestinal microorganisms play a crucial role in chicken health and production performance, especially in the research of traditional and organic feeding methods. The intestinal contents of organic and feed chickens were analyzed by 16S rRNA gene and metagenome technology. The results showed that th...
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| Format: | Article |
| Language: | English |
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Frontiers Media S.A.
2025-01-01
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| Series: | Frontiers in Microbiology |
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| Online Access: | https://www.frontiersin.org/articles/10.3389/fmicb.2024.1509461/full |
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| author | Wenzhou Zhang Xiaoru Jian Siqi Ding Jiamin Chang Shouping Ji Shouping Ji Yulang Chi Yulang Chi |
| author_facet | Wenzhou Zhang Xiaoru Jian Siqi Ding Jiamin Chang Shouping Ji Shouping Ji Yulang Chi Yulang Chi |
| author_sort | Wenzhou Zhang |
| collection | DOAJ |
| description | Intestinal microorganisms play a crucial role in chicken health and production performance, especially in the research of traditional and organic feeding methods. The intestinal contents of organic and feed chickens were analyzed by 16S rRNA gene and metagenome technology. The results showed that the microbial diversity of organic chickens was significantly higher than that of the feed chickens, especially the key microorganisms, such as Enterococcus, were more abundant in organic chickens. The functional analysis of metagenome revealed the significant difference in the metabolic function of intestinal microorganisms between them. The present study provides new insights into the gut microbiota characteristics of the organic and feed chicken based on amplicon and metagenomic sequencing. Our results are helpful to fully illustrate the effects of different feeding methods on intestinal microorganisms in chickens and can offer a more scientific basis for chicken production management. |
| format | Article |
| id | doaj-art-7336e279b18e48cab6fbff5db75b2c30 |
| institution | Kabale University |
| issn | 1664-302X |
| language | English |
| publishDate | 2025-01-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| series | Frontiers in Microbiology |
| spelling | doaj-art-7336e279b18e48cab6fbff5db75b2c302025-01-23T06:56:40ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2025-01-011510.3389/fmicb.2024.15094611509461Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencingWenzhou Zhang0Xiaoru Jian1Siqi Ding2Jiamin Chang3Shouping Ji4Shouping Ji5Yulang Chi6Yulang Chi7School of Pharmacy, QuanZhou Medical College, Quanzhou, ChinaCollege of Oceanology and Food Science, Quanzhou Normal University, Quanzhou, ChinaCollege of Oceanology and Food Science, Quanzhou Normal University, Quanzhou, ChinaCollege of Oceanology and Food Science, Quanzhou Normal University, Quanzhou, ChinaCollege of Oceanology and Food Science, Quanzhou Normal University, Quanzhou, ChinaFujian Province Key Laboratory for the Development of Bioactive Material from Marine Algae, Quanzhou Normal University, Quanzhou, ChinaCollege of Oceanology and Food Science, Quanzhou Normal University, Quanzhou, ChinaFujian Province Key Laboratory for the Development of Bioactive Material from Marine Algae, Quanzhou Normal University, Quanzhou, ChinaIntestinal microorganisms play a crucial role in chicken health and production performance, especially in the research of traditional and organic feeding methods. The intestinal contents of organic and feed chickens were analyzed by 16S rRNA gene and metagenome technology. The results showed that the microbial diversity of organic chickens was significantly higher than that of the feed chickens, especially the key microorganisms, such as Enterococcus, were more abundant in organic chickens. The functional analysis of metagenome revealed the significant difference in the metabolic function of intestinal microorganisms between them. The present study provides new insights into the gut microbiota characteristics of the organic and feed chicken based on amplicon and metagenomic sequencing. Our results are helpful to fully illustrate the effects of different feeding methods on intestinal microorganisms in chickens and can offer a more scientific basis for chicken production management.https://www.frontiersin.org/articles/10.3389/fmicb.2024.1509461/fullintestinal microorganismsorganic chickensfeed chickensmetagenome technologymicrobial diversity |
| spellingShingle | Wenzhou Zhang Xiaoru Jian Siqi Ding Jiamin Chang Shouping Ji Shouping Ji Yulang Chi Yulang Chi Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing Frontiers in Microbiology intestinal microorganisms organic chickens feed chickens metagenome technology microbial diversity |
| title | Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing |
| title_full | Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing |
| title_fullStr | Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing |
| title_full_unstemmed | Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing |
| title_short | Insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing |
| title_sort | insights into the gut microbiota characteristics between the organic and traditional feeding chickens based on amplicon and metagenomic sequencing |
| topic | intestinal microorganisms organic chickens feed chickens metagenome technology microbial diversity |
| url | https://www.frontiersin.org/articles/10.3389/fmicb.2024.1509461/full |
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