Gut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulation

Abstract Background Common variable immunodeficiency (CVID) is characterized by hypogammaglobulinemia and recurrent infections. Significant morbidity and mortality are caused by immune dysregulation complications (CVIDid), which affect around one-third of CVID patients and have a poorly understood e...

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Main Authors: Roos-Marijn Berbers, Fernanda L. Paganelli, Joris M. van Montfrans, Pauline M. Ellerbroek, Marco C. Viveen, Malbert R. C. Rogers, Moniek Salomons, Jaap Schuurmans, Martine van Stigt Thans, Remi M. M. Vanmaris, Lodewijk A. A. Brosens, Maria Marlot van der Wal, Virgil A. S. H. Dalm, P. Martin van Hagen, Annick A. J. M. van de Ven, Hae-Won Uh, Femke van Wijk, Rob J. L. Willems, Helen L. Leavis
Format: Article
Language:English
Published: BMC 2025-01-01
Series:Microbiome
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Online Access:https://doi.org/10.1186/s40168-024-01982-y
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author Roos-Marijn Berbers
Fernanda L. Paganelli
Joris M. van Montfrans
Pauline M. Ellerbroek
Marco C. Viveen
Malbert R. C. Rogers
Moniek Salomons
Jaap Schuurmans
Martine van Stigt Thans
Remi M. M. Vanmaris
Lodewijk A. A. Brosens
Maria Marlot van der Wal
Virgil A. S. H. Dalm
P. Martin van Hagen
Annick A. J. M. van de Ven
Hae-Won Uh
Femke van Wijk
Rob J. L. Willems
Helen L. Leavis
author_facet Roos-Marijn Berbers
Fernanda L. Paganelli
Joris M. van Montfrans
Pauline M. Ellerbroek
Marco C. Viveen
Malbert R. C. Rogers
Moniek Salomons
Jaap Schuurmans
Martine van Stigt Thans
Remi M. M. Vanmaris
Lodewijk A. A. Brosens
Maria Marlot van der Wal
Virgil A. S. H. Dalm
P. Martin van Hagen
Annick A. J. M. van de Ven
Hae-Won Uh
Femke van Wijk
Rob J. L. Willems
Helen L. Leavis
author_sort Roos-Marijn Berbers
collection DOAJ
description Abstract Background Common variable immunodeficiency (CVID) is characterized by hypogammaglobulinemia and recurrent infections. Significant morbidity and mortality are caused by immune dysregulation complications (CVIDid), which affect around one-third of CVID patients and have a poorly understood etiology. Here, we investigate the hypothesis that gut microbial dysbiosis contributes to the inflammation underlying CVIDid. Results Bacterial invasion of colonic crypts was observed in CVID (3/15) and X-linked agammaglobulinemia (XLA, 1/3), but not in healthy control (HC, 0/9) biopsies. Fecal gut microbiota was characterized using 16S rRNA-targeted amplicon sequencing. Increased bacterial load, decreased alpha diversity and distinct beta diversity were observed in CVIDid (n = 42) compared to HC (n = 48), and similar results were seen in CVID with IgA deficiency (n = 40) compared to HC. CVIDid and CVID-IgA showed enrichment of the genus Enterococcus, and in vitro studies confirmed the inflammatory potential of Enterococcus gallinarum and Enterococcus hirae in patient monocytes. Conclusions This study further supports the hypothesis that a dysregulated gut microbiota, with IgA deficiency as an important driving factor, contributes to systemic inflammation in primary antibody deficiency, and introduces enterococci as potential pathobionts in CVIDid. Video Abstract
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spelling doaj-art-72a404cdfa474b8cb6b8f1b637af96bf2025-01-19T12:32:34ZengBMCMicrobiome2049-26182025-01-0113111710.1186/s40168-024-01982-yGut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulationRoos-Marijn Berbers0Fernanda L. Paganelli1Joris M. van Montfrans2Pauline M. Ellerbroek3Marco C. Viveen4Malbert R. C. Rogers5Moniek Salomons6Jaap Schuurmans7Martine van Stigt Thans8Remi M. M. Vanmaris9Lodewijk A. A. Brosens10Maria Marlot van der Wal11Virgil A. S. H. Dalm12P. Martin van Hagen13Annick A. J. M. van de Ven14Hae-Won Uh15Femke van Wijk16Rob J. L. Willems17Helen L. Leavis18Department of Medical Microbiology, University Medical Center Utrecht and Utrecht UniversityDepartment of Medical Microbiology, University Medical Center Utrecht and Utrecht UniversityDepartment of Pediatric Immunology and Infectious Diseases, University Medical Center Utrecht and Utrecht UniversityDepartment of Internal Medicine and Infectious Diseases, University Medical Center Utrecht and Utrecht UniversityDepartment of Medical Microbiology, University Medical Center Utrecht and Utrecht UniversityDepartment of Medical Microbiology, University Medical Center Utrecht and Utrecht UniversityDepartment of Medical Microbiology, University Medical Center Utrecht and Utrecht UniversityDepartment of Rheumatology and Clinical Immunology, University Medical Center Utrecht and Utrecht UniversityDepartment of Rheumatology and Clinical Immunology, University Medical Center Utrecht and Utrecht UniversityDepartment of Medical Microbiology, University Medical Center Utrecht and Utrecht UniversityDepartment of Pathology, University Medical Center Utrecht and Utrecht UniversityCenter for Translational Immunology, University Medical Center Utrecht and Utrecht UniversityDepartment of Internal Medicine, Division of Clinical Immunology, Erasmus MC University Medical CenterDepartment of Internal Medicine, Division of Clinical Immunology, Erasmus MC University Medical CenterDepartments of Internal Medicine and Allergology, Rheumatology and Clinical Immunology, University Medical Center GroningenDepartment of Data Science and Biostatistics, Julius Center, University Medical Center Utrecht and Utrecht UniversityCenter for Translational Immunology, University Medical Center Utrecht and Utrecht UniversityDepartment of Medical Microbiology, University Medical Center Utrecht and Utrecht UniversityDepartment of Rheumatology and Clinical Immunology, University Medical Center Utrecht and Utrecht UniversityAbstract Background Common variable immunodeficiency (CVID) is characterized by hypogammaglobulinemia and recurrent infections. Significant morbidity and mortality are caused by immune dysregulation complications (CVIDid), which affect around one-third of CVID patients and have a poorly understood etiology. Here, we investigate the hypothesis that gut microbial dysbiosis contributes to the inflammation underlying CVIDid. Results Bacterial invasion of colonic crypts was observed in CVID (3/15) and X-linked agammaglobulinemia (XLA, 1/3), but not in healthy control (HC, 0/9) biopsies. Fecal gut microbiota was characterized using 16S rRNA-targeted amplicon sequencing. Increased bacterial load, decreased alpha diversity and distinct beta diversity were observed in CVIDid (n = 42) compared to HC (n = 48), and similar results were seen in CVID with IgA deficiency (n = 40) compared to HC. CVIDid and CVID-IgA showed enrichment of the genus Enterococcus, and in vitro studies confirmed the inflammatory potential of Enterococcus gallinarum and Enterococcus hirae in patient monocytes. Conclusions This study further supports the hypothesis that a dysregulated gut microbiota, with IgA deficiency as an important driving factor, contributes to systemic inflammation in primary antibody deficiency, and introduces enterococci as potential pathobionts in CVIDid. Video Abstracthttps://doi.org/10.1186/s40168-024-01982-yCommon variable immunodeficiency (CVID)Immune dysregulationGut microbiotaPathobionts
spellingShingle Roos-Marijn Berbers
Fernanda L. Paganelli
Joris M. van Montfrans
Pauline M. Ellerbroek
Marco C. Viveen
Malbert R. C. Rogers
Moniek Salomons
Jaap Schuurmans
Martine van Stigt Thans
Remi M. M. Vanmaris
Lodewijk A. A. Brosens
Maria Marlot van der Wal
Virgil A. S. H. Dalm
P. Martin van Hagen
Annick A. J. M. van de Ven
Hae-Won Uh
Femke van Wijk
Rob J. L. Willems
Helen L. Leavis
Gut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulation
Microbiome
Common variable immunodeficiency (CVID)
Immune dysregulation
Gut microbiota
Pathobionts
title Gut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulation
title_full Gut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulation
title_fullStr Gut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulation
title_full_unstemmed Gut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulation
title_short Gut microbial dysbiosis, IgA, and Enterococcus in common variable immunodeficiency with immune dysregulation
title_sort gut microbial dysbiosis iga and enterococcus in common variable immunodeficiency with immune dysregulation
topic Common variable immunodeficiency (CVID)
Immune dysregulation
Gut microbiota
Pathobionts
url https://doi.org/10.1186/s40168-024-01982-y
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