Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist Communities

As transitional ecosystems between land and sea, estuaries are characterized by a unique environment that supports complex and diverse microbial communities. A comprehensive analysis of microbial diversity and ecological processes at different trophic levels is crucial for understanding the ecologic...

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Main Authors: Weiyue Zhang, Yunlei Zhang, Zhizhuo Shao, Yi Sun, Hongjun Li
Format: Article
Language:English
Published: MDPI AG 2025-01-01
Series:Microorganisms
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Online Access:https://www.mdpi.com/2076-2607/13/1/214
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author Weiyue Zhang
Yunlei Zhang
Zhizhuo Shao
Yi Sun
Hongjun Li
author_facet Weiyue Zhang
Yunlei Zhang
Zhizhuo Shao
Yi Sun
Hongjun Li
author_sort Weiyue Zhang
collection DOAJ
description As transitional ecosystems between land and sea, estuaries are characterized by a unique environment that supports complex and diverse microbial communities. A comprehensive analysis of microbial diversity and ecological processes at different trophic levels is crucial for understanding the ecological functions of estuarine ecosystems. In this study, we systematically analyzed the diversity patterns, community assembly, and environmental adaptability of bacterial and protist communities using high-throughput sequencing techniques. The results revealed a higher alpha diversity for the bacteria than for protists, and the beta diversity pattern was dominated by species turnover in both communities. In addition, the two community assemblages were shown to be dominated by deterministic and stochastic processes, respectively. Furthermore, our results emphasized the influence of the local species pool on microbial communities and the fact that, at larger scales, geographic factors played a more significant role than environmental factors in driving microbial community variation. The study also revealed differences in environmental adaptability among different microbial types. Bacteria exhibited strong adaptability to salinity, while protists demonstrated greater resilience to variations in dissolved oxygen, nitrate, and ammonium concentrations. These results suggested differences in environmental adaptation strategies among microorganisms at different trophic levels, with bacteria demonstrating a more pronounced environmental filtering effect.
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publishDate 2025-01-01
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series Microorganisms
spelling doaj-art-6960dc9d6bae4d9f8bd45159ac8c31292025-01-24T13:43:05ZengMDPI AGMicroorganisms2076-26072025-01-0113121410.3390/microorganisms13010214Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist CommunitiesWeiyue Zhang0Yunlei Zhang1Zhizhuo Shao2Yi Sun3Hongjun Li4State Environmental Protection Key Laboratory of Coastal Ecosystem, National Marine Environmental Monitoring Center, Dalian 116023, ChinaState Environmental Protection Key Laboratory of Coastal Ecosystem, National Marine Environmental Monitoring Center, Dalian 116023, ChinaState Environmental Protection Key Laboratory of Coastal Ecosystem, National Marine Environmental Monitoring Center, Dalian 116023, ChinaState Environmental Protection Key Laboratory of Coastal Ecosystem, National Marine Environmental Monitoring Center, Dalian 116023, ChinaState Environmental Protection Key Laboratory of Coastal Ecosystem, National Marine Environmental Monitoring Center, Dalian 116023, ChinaAs transitional ecosystems between land and sea, estuaries are characterized by a unique environment that supports complex and diverse microbial communities. A comprehensive analysis of microbial diversity and ecological processes at different trophic levels is crucial for understanding the ecological functions of estuarine ecosystems. In this study, we systematically analyzed the diversity patterns, community assembly, and environmental adaptability of bacterial and protist communities using high-throughput sequencing techniques. The results revealed a higher alpha diversity for the bacteria than for protists, and the beta diversity pattern was dominated by species turnover in both communities. In addition, the two community assemblages were shown to be dominated by deterministic and stochastic processes, respectively. Furthermore, our results emphasized the influence of the local species pool on microbial communities and the fact that, at larger scales, geographic factors played a more significant role than environmental factors in driving microbial community variation. The study also revealed differences in environmental adaptability among different microbial types. Bacteria exhibited strong adaptability to salinity, while protists demonstrated greater resilience to variations in dissolved oxygen, nitrate, and ammonium concentrations. These results suggested differences in environmental adaptation strategies among microorganisms at different trophic levels, with bacteria demonstrating a more pronounced environmental filtering effect.https://www.mdpi.com/2076-2607/13/1/214bacteriaprotistsdiversity patternscommunity assemblybiogeographical pattern
spellingShingle Weiyue Zhang
Yunlei Zhang
Zhizhuo Shao
Yi Sun
Hongjun Li
Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist Communities
Microorganisms
bacteria
protists
diversity patterns
community assembly
biogeographical pattern
title Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist Communities
title_full Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist Communities
title_fullStr Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist Communities
title_full_unstemmed Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist Communities
title_short Differences in Biogeographic Patterns and Mechanisms of Assembly in Estuarine Bacterial and Protist Communities
title_sort differences in biogeographic patterns and mechanisms of assembly in estuarine bacterial and protist communities
topic bacteria
protists
diversity patterns
community assembly
biogeographical pattern
url https://www.mdpi.com/2076-2607/13/1/214
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AT yunleizhang differencesinbiogeographicpatternsandmechanismsofassemblyinestuarinebacterialandprotistcommunities
AT zhizhuoshao differencesinbiogeographicpatternsandmechanismsofassemblyinestuarinebacterialandprotistcommunities
AT yisun differencesinbiogeographicpatternsandmechanismsofassemblyinestuarinebacterialandprotistcommunities
AT hongjunli differencesinbiogeographicpatternsandmechanismsofassemblyinestuarinebacterialandprotistcommunities