Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus
Data on identification and analysis of whole genome nucleotide sequence of strain «O» of avian infectious laryngotracheitis virus are demonstrated. In the process of the whole genome sequence mapping a number of unique and significant nucleotide properties has been identified in genes that code surf...
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| Format: | Article |
| Language: | English |
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Da Vinci Media
2018-04-01
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| Series: | Ветеринария сегодня |
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| Online Access: | https://veterinary.arriah.ru/jour/article/view/234 |
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| author | A. A. Kozlov N. G. Zinyakov S. N. Kolosov N. S. Mudrak I. A. Chvala |
| author_facet | A. A. Kozlov N. G. Zinyakov S. N. Kolosov N. S. Mudrak I. A. Chvala |
| author_sort | A. A. Kozlov |
| collection | DOAJ |
| description | Data on identification and analysis of whole genome nucleotide sequence of strain «O» of avian infectious laryngotracheitis virus are demonstrated. In the process of the whole genome sequence mapping a number of unique and significant nucleotide properties has been identified in genes that code surface proteins responsible for interacting with cell receptors. Strain «O» has been demonstrated to belong to phylogenetic group 1 subgroup 1 (1.1). Genetic relatedness of domestic strain «0» to other vaccine strains widely used in global poultry industry such as Serva, Cover, Hudson and Fowl laryngo has been determined. The mapped nucleotide sequence has been deposited in the international GenBank database under the accession number KU128407. It is the first complete genetic characterization of the domestic vaccine strain. |
| format | Article |
| id | doaj-art-648e11ea8a77452bb57ddbdcfae9df84 |
| institution | Kabale University |
| issn | 2304-196X 2658-6959 |
| language | English |
| publishDate | 2018-04-01 |
| publisher | Da Vinci Media |
| record_format | Article |
| series | Ветеринария сегодня |
| spelling | doaj-art-648e11ea8a77452bb57ddbdcfae9df842025-02-06T09:52:05ZengDa Vinci MediaВетеринария сегодня2304-196X2658-69592018-04-01015558234Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virusA. A. Kozlov0N. G. Zinyakov1S. N. Kolosov2N. S. Mudrak3I. A. Chvala4FGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirFGBI "ARRIAH", VladimirData on identification and analysis of whole genome nucleotide sequence of strain «O» of avian infectious laryngotracheitis virus are demonstrated. In the process of the whole genome sequence mapping a number of unique and significant nucleotide properties has been identified in genes that code surface proteins responsible for interacting with cell receptors. Strain «O» has been demonstrated to belong to phylogenetic group 1 subgroup 1 (1.1). Genetic relatedness of domestic strain «0» to other vaccine strains widely used in global poultry industry such as Serva, Cover, Hudson and Fowl laryngo has been determined. The mapped nucleotide sequence has been deposited in the international GenBank database under the accession number KU128407. It is the first complete genetic characterization of the domestic vaccine strain.https://veterinary.arriah.ru/jour/article/view/234вирус инфекционного ларинготрахеитаполногеномное секвенированиепоследовательность полного геномакартирование геномафилогенетический анализinfectious laryngortacheitis viruswhole genome sequencingwhole genome sequencegene mappingphylogenetic analysis |
| spellingShingle | A. A. Kozlov N. G. Zinyakov S. N. Kolosov N. S. Mudrak I. A. Chvala Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus Ветеринария сегодня вирус инфекционного ларинготрахеита полногеномное секвенирование последовательность полного генома картирование генома филогенетический анализ infectious laryngortacheitis virus whole genome sequencing whole genome sequence gene mapping phylogenetic analysis |
| title | Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus |
| title_full | Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus |
| title_fullStr | Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus |
| title_full_unstemmed | Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus |
| title_short | Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus |
| title_sort | analysis of whole genome sequence of strain 0 of avian infectious laryngotracheitis virus |
| topic | вирус инфекционного ларинготрахеита полногеномное секвенирование последовательность полного генома картирование генома филогенетический анализ infectious laryngortacheitis virus whole genome sequencing whole genome sequence gene mapping phylogenetic analysis |
| url | https://veterinary.arriah.ru/jour/article/view/234 |
| work_keys_str_mv | AT aakozlov analysisofwholegenomesequenceofstrain0ofavianinfectiouslaryngotracheitisvirus AT ngzinyakov analysisofwholegenomesequenceofstrain0ofavianinfectiouslaryngotracheitisvirus AT snkolosov analysisofwholegenomesequenceofstrain0ofavianinfectiouslaryngotracheitisvirus AT nsmudrak analysisofwholegenomesequenceofstrain0ofavianinfectiouslaryngotracheitisvirus AT iachvala analysisofwholegenomesequenceofstrain0ofavianinfectiouslaryngotracheitisvirus |