Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapy

Abstract Previous research indicates that Transforming growth factor beta-3 (TGFβ3) expression levels correlate with breast cancer metastasis, and elevated TGFβ3 levels have been linked with poor overall survival in breast cancer patients. The study used computational methods to examine curcumin’s e...

Full description

Saved in:
Bibliographic Details
Main Authors: Ali G. Alkhathami, Mohammad Y. Alshahrani, Saad Ali Alshehri, Nazim Nasir, Shadma Wahab
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Scientific Reports
Subjects:
Online Access:https://doi.org/10.1038/s41598-025-86289-0
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1832585844049838080
author Ali G. Alkhathami
Mohammad Y. Alshahrani
Saad Ali Alshehri
Nazim Nasir
Shadma Wahab
author_facet Ali G. Alkhathami
Mohammad Y. Alshahrani
Saad Ali Alshehri
Nazim Nasir
Shadma Wahab
author_sort Ali G. Alkhathami
collection DOAJ
description Abstract Previous research indicates that Transforming growth factor beta-3 (TGFβ3) expression levels correlate with breast cancer metastasis, and elevated TGFβ3 levels have been linked with poor overall survival in breast cancer patients. The study used computational methods to examine curcumin’s effects on TGFβ3, a chemical with antiviral and anticancer characteristics. The curcumin has low Molecular Weight 368.130 (MW) and follows Lipinski Rule, Pfizer Rule, GSK Rule, Golden Triangle, BMS Rule, zero PAINS alert and Acute Toxicity Rule with zero alert. Any drug-like contender must follow these qualities. Through molecular docking analyses, curcumin displayed favourable binding affinities at the TGFβ3 binding pocket, forming key interactions such as hydrogen bonds with residues like ASP323, ARG325, VAL333, HIS334, PRO336, LYS337, GLY393, and ARG394. 500 ns molecular dynamic simulations examined docking interactions. Molecular dynamics (MD) simulations trajectories analysis, by calculating lower structural deviation, minimal residual fluctuations, structural compactness assessment by calculating radius of gyration, surface area calculation which interact with solvent, role of hydrogen bonding, and secondary structural analyses. Furthermore, principal component, Gibbs free energy landscape and MMPBSA analysis, signifying system stability. These data suggest curcumin may inhibit TGFβ3, providing a framework for developing new compounds targeting this protein.
format Article
id doaj-art-612b60d7a68049068a17f50ea90e283b
institution Kabale University
issn 2045-2322
language English
publishDate 2025-01-01
publisher Nature Portfolio
record_format Article
series Scientific Reports
spelling doaj-art-612b60d7a68049068a17f50ea90e283b2025-01-26T12:26:30ZengNature PortfolioScientific Reports2045-23222025-01-0115111110.1038/s41598-025-86289-0Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapyAli G. Alkhathami0Mohammad Y. Alshahrani1Saad Ali Alshehri2Nazim Nasir3Shadma Wahab4Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid UniversityDepartment of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Khalid UniversityDepartment of Pharmacognosy, College of Pharmacy, King Khalid UniversityDepartment of Basic Medical Sciences, College of applied medical sciences, King khalid UniversityDepartment of Pharmacognosy, College of Pharmacy, King Khalid UniversityAbstract Previous research indicates that Transforming growth factor beta-3 (TGFβ3) expression levels correlate with breast cancer metastasis, and elevated TGFβ3 levels have been linked with poor overall survival in breast cancer patients. The study used computational methods to examine curcumin’s effects on TGFβ3, a chemical with antiviral and anticancer characteristics. The curcumin has low Molecular Weight 368.130 (MW) and follows Lipinski Rule, Pfizer Rule, GSK Rule, Golden Triangle, BMS Rule, zero PAINS alert and Acute Toxicity Rule with zero alert. Any drug-like contender must follow these qualities. Through molecular docking analyses, curcumin displayed favourable binding affinities at the TGFβ3 binding pocket, forming key interactions such as hydrogen bonds with residues like ASP323, ARG325, VAL333, HIS334, PRO336, LYS337, GLY393, and ARG394. 500 ns molecular dynamic simulations examined docking interactions. Molecular dynamics (MD) simulations trajectories analysis, by calculating lower structural deviation, minimal residual fluctuations, structural compactness assessment by calculating radius of gyration, surface area calculation which interact with solvent, role of hydrogen bonding, and secondary structural analyses. Furthermore, principal component, Gibbs free energy landscape and MMPBSA analysis, signifying system stability. These data suggest curcumin may inhibit TGFβ3, providing a framework for developing new compounds targeting this protein.https://doi.org/10.1038/s41598-025-86289-0Transforming growth factor β-3Breast cancerCurcuminMolecular dockingMolecular dynamic simulation
spellingShingle Ali G. Alkhathami
Mohammad Y. Alshahrani
Saad Ali Alshehri
Nazim Nasir
Shadma Wahab
Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapy
Scientific Reports
Transforming growth factor β-3
Breast cancer
Curcumin
Molecular docking
Molecular dynamic simulation
title Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapy
title_full Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapy
title_fullStr Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapy
title_full_unstemmed Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapy
title_short Curcumin as a potential inhibitor of TGFβ3 computational insights for breast cancer therapy
title_sort curcumin as a potential inhibitor of tgfβ3 computational insights for breast cancer therapy
topic Transforming growth factor β-3
Breast cancer
Curcumin
Molecular docking
Molecular dynamic simulation
url https://doi.org/10.1038/s41598-025-86289-0
work_keys_str_mv AT aligalkhathami curcuminasapotentialinhibitoroftgfb3computationalinsightsforbreastcancertherapy
AT mohammadyalshahrani curcuminasapotentialinhibitoroftgfb3computationalinsightsforbreastcancertherapy
AT saadalialshehri curcuminasapotentialinhibitoroftgfb3computationalinsightsforbreastcancertherapy
AT nazimnasir curcuminasapotentialinhibitoroftgfb3computationalinsightsforbreastcancertherapy
AT shadmawahab curcuminasapotentialinhibitoroftgfb3computationalinsightsforbreastcancertherapy