Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius)
Mystus cavasius, known as Gangetic mystus, is a freshwater indigenous catfish. The present study represents the first-ever complete mitochondrial genome sequencing of M. cavasius. The whole mitochondrial genome size is 16,554 bp (GenBank accession number OR018997). The mitogenome organization consis...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2024-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2024.2427106 |
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| author | Suvra Roy Pranaya Kumar Parida V. L. Ramya Vikash Kumar Dibakar Bhakta Bijay Kumar Behera Basanta Kumar Das |
| author_facet | Suvra Roy Pranaya Kumar Parida V. L. Ramya Vikash Kumar Dibakar Bhakta Bijay Kumar Behera Basanta Kumar Das |
| author_sort | Suvra Roy |
| collection | DOAJ |
| description | Mystus cavasius, known as Gangetic mystus, is a freshwater indigenous catfish. The present study represents the first-ever complete mitochondrial genome sequencing of M. cavasius. The whole mitochondrial genome size is 16,554 bp (GenBank accession number OR018997). The mitogenome organization consists of total 37 genes, with 13 protein-coding genes, two rRNA, 22 tRNAs, and a D-loop regulatory region. Among these, 28 genes are coded on the heavy strand, while eight tRNA genes and ND6 are encoded separately. Phylogenetic analysis reveals that M. cavasius clusters with other Mystus species and bagrid catfishes. This work contributes valuable insights into structural characterization and phylogenetic relationships. |
| format | Article |
| id | doaj-art-5eb96c38ae484d11b541567fc0ef1acb |
| institution | OA Journals |
| issn | 2380-2359 |
| language | English |
| publishDate | 2024-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-5eb96c38ae484d11b541567fc0ef1acb2025-08-20T01:59:48ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592024-11-019111539154310.1080/23802359.2024.2427106Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius)Suvra Roy0Pranaya Kumar Parida1V. L. Ramya2Vikash Kumar3Dibakar Bhakta4Bijay Kumar Behera5Basanta Kumar Das6Aquatic Environmental Biotechnology (AEB) Division, ICAR-CIFRI, Barrackpore, IndiaAquatic Environmental Biotechnology (AEB) Division, ICAR-CIFRI, Barrackpore, IndiaRegional Centre of ICAR-CIFRI, Bangalore, IndiaAquatic Environmental Biotechnology (AEB) Division, ICAR-CIFRI, Barrackpore, IndiaICAR-Central Inland Fisheries Research Institute (CIFRI), Barrackpore, IndiaAquatic Environmental Biotechnology (AEB) Division, ICAR-CIFRI, Barrackpore, IndiaICAR-Central Inland Fisheries Research Institute (CIFRI), Barrackpore, IndiaMystus cavasius, known as Gangetic mystus, is a freshwater indigenous catfish. The present study represents the first-ever complete mitochondrial genome sequencing of M. cavasius. The whole mitochondrial genome size is 16,554 bp (GenBank accession number OR018997). The mitogenome organization consists of total 37 genes, with 13 protein-coding genes, two rRNA, 22 tRNAs, and a D-loop regulatory region. Among these, 28 genes are coded on the heavy strand, while eight tRNA genes and ND6 are encoded separately. Phylogenetic analysis reveals that M. cavasius clusters with other Mystus species and bagrid catfishes. This work contributes valuable insights into structural characterization and phylogenetic relationships.https://www.tandfonline.com/doi/10.1080/23802359.2024.2427106Mitochondrial genomeMystus cavasiusindigenous catfishphylogenynext-generation sequencing |
| spellingShingle | Suvra Roy Pranaya Kumar Parida V. L. Ramya Vikash Kumar Dibakar Bhakta Bijay Kumar Behera Basanta Kumar Das Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius) Mitochondrial DNA. Part B. Resources Mitochondrial genome Mystus cavasius indigenous catfish phylogeny next-generation sequencing |
| title | Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius) |
| title_full | Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius) |
| title_fullStr | Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius) |
| title_full_unstemmed | Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius) |
| title_short | Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius) |
| title_sort | whole mitochondrial genome sequencing and phylogenetic analysis of gangetic mystus mystus cavasius |
| topic | Mitochondrial genome Mystus cavasius indigenous catfish phylogeny next-generation sequencing |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2024.2427106 |
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