RNA modifications: emerging players in the regulation of reproduction and development

The intricate world of RNA modifications, collectively termed the epitranscriptome, covers over 170 identified modifications and impacts RNA metabolism and, consequently, almost all biological processes. In this review, we focus on the regu...

Full description

Saved in:
Bibliographic Details
Main Authors: Wen Junfei, Zhu Qifan, Liu Yong, Gou Lan-Tao
Format: Article
Language:English
Published: China Science Publishing & Media Ltd. 2024-11-01
Series:Acta Biochimica et Biophysica Sinica
Subjects:
Online Access:https://www.sciengine.com/doi/10.3724/abbs.2024201
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1832590327538515968
author Wen Junfei
Zhu Qifan
Liu Yong
Gou Lan-Tao
author_facet Wen Junfei
Zhu Qifan
Liu Yong
Gou Lan-Tao
author_sort Wen Junfei
collection DOAJ
description The intricate world of RNA modifications, collectively termed the epitranscriptome, covers over 170 identified modifications and impacts RNA metabolism and, consequently, almost all biological processes. In this review, we focus on the regulatory roles and biological functions of a panel of dominant RNA modifications (including m<sup>6</sup>A, m<sup>5</sup>C, Ψ, ac<sup>4</sup>C, m<sup>1</sup>A, and m<sup>7</sup>G) on three RNA types—mRNA, tRNA, and rRNA—in mammalian development, particularly in the context of reproduction as well as embryonic development. We discuss in detail how those modifications, along with their regulatory proteins, affect RNA processing, structure, localization, stability, and translation efficiency. We also highlight the associations among dysfunctions in RNA modification-related proteins, abnormal modification deposition and various diseases, emphasizing the roles of RNA modifications in critical developmental processes such as stem cell self-renewal and cell fate transition. Elucidating the molecular mechanisms by which RNA modifications influence diverse developmental processes holds promise for developing innovative strategies to manage developmental disorders. Finally, we outline several unexplored areas in the field of RNA modification that warrant further investigation.
format Article
id doaj-art-56dbf07698e7417bbb7bbd40fc3c3b3c
institution Kabale University
issn 1672-9145
language English
publishDate 2024-11-01
publisher China Science Publishing & Media Ltd.
record_format Article
series Acta Biochimica et Biophysica Sinica
spelling doaj-art-56dbf07698e7417bbb7bbd40fc3c3b3c2025-01-24T00:56:47ZengChina Science Publishing & Media Ltd.Acta Biochimica et Biophysica Sinica1672-91452024-11-0157335810.3724/abbs.202420120d259ccRNA modifications: emerging players in the regulation of reproduction and developmentWen Junfei0Zhu Qifan1Liu Yong2Gou Lan-Tao3["Key Laboratory of RNA Innovation, Science and Engineering, Shanghai Key Laboratory of Molecular Andrology, CAS Center for Excellence Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai 200031, China","University of Chinese Academy of Sciences, Beijing 100049, China"]["Key Laboratory of RNA Innovation, Science and Engineering, Shanghai Key Laboratory of Molecular Andrology, CAS Center for Excellence Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai 200031, China","University of Chinese Academy of Sciences, Beijing 100049, China"]["Key Laboratory of RNA Innovation, Science and Engineering, Shanghai Key Laboratory of Molecular Andrology, CAS Center for Excellence Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai 200031, China"]["Key Laboratory of RNA Innovation, Science and Engineering, Shanghai Key Laboratory of Molecular Andrology, CAS Center for Excellence Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai 200031, China","University of Chinese Academy of Sciences, Beijing 100049, China"]The intricate world of RNA modifications, collectively termed the epitranscriptome, covers over 170 identified modifications and impacts RNA metabolism and, consequently, almost all biological processes. In this review, we focus on the regulatory roles and biological functions of a panel of dominant RNA modifications (including m<sup>6</sup>A, m<sup>5</sup>C, Ψ, ac<sup>4</sup>C, m<sup>1</sup>A, and m<sup>7</sup>G) on three RNA types—mRNA, tRNA, and rRNA—in mammalian development, particularly in the context of reproduction as well as embryonic development. We discuss in detail how those modifications, along with their regulatory proteins, affect RNA processing, structure, localization, stability, and translation efficiency. We also highlight the associations among dysfunctions in RNA modification-related proteins, abnormal modification deposition and various diseases, emphasizing the roles of RNA modifications in critical developmental processes such as stem cell self-renewal and cell fate transition. Elucidating the molecular mechanisms by which RNA modifications influence diverse developmental processes holds promise for developing innovative strategies to manage developmental disorders. Finally, we outline several unexplored areas in the field of RNA modification that warrant further investigation.https://www.sciengine.com/doi/10.3724/abbs.2024201RNA modificationreproductionepitranscriptomicmammalian developmentdevelopmental disease
spellingShingle Wen Junfei
Zhu Qifan
Liu Yong
Gou Lan-Tao
RNA modifications: emerging players in the regulation of reproduction and development
Acta Biochimica et Biophysica Sinica
RNA modification
reproduction
epitranscriptomic
mammalian development
developmental disease
title RNA modifications: emerging players in the regulation of reproduction and development
title_full RNA modifications: emerging players in the regulation of reproduction and development
title_fullStr RNA modifications: emerging players in the regulation of reproduction and development
title_full_unstemmed RNA modifications: emerging players in the regulation of reproduction and development
title_short RNA modifications: emerging players in the regulation of reproduction and development
title_sort rna modifications emerging players in the regulation of reproduction and development
topic RNA modification
reproduction
epitranscriptomic
mammalian development
developmental disease
url https://www.sciengine.com/doi/10.3724/abbs.2024201
work_keys_str_mv AT wenjunfei rnamodificationsemergingplayersintheregulationofreproductionanddevelopment
AT zhuqifan rnamodificationsemergingplayersintheregulationofreproductionanddevelopment
AT liuyong rnamodificationsemergingplayersintheregulationofreproductionanddevelopment
AT goulantao rnamodificationsemergingplayersintheregulationofreproductionanddevelopment