MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear

Abstract The leaves above the ear serve as a major source of carbohydrates for grain filling in maize. However, increasing the number of leaves above the ear to strengthen the source and improve maize yield remains challenging in modern maize breeding. Here, we clone the causative gene of the quanti...

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Main Authors: Yan Li, Jian Wang, Shuyang Zhong, Qiang Huo, Qun Wang, Yunlu Shi, Hangqin Liu, Jiacheng Liu, Yang Song, Xiaojian Fang, Zhongwei Lin
Format: Article
Language:English
Published: Nature Portfolio 2024-11-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-024-54148-7
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author Yan Li
Jian Wang
Shuyang Zhong
Qiang Huo
Qun Wang
Yunlu Shi
Hangqin Liu
Jiacheng Liu
Yang Song
Xiaojian Fang
Zhongwei Lin
author_facet Yan Li
Jian Wang
Shuyang Zhong
Qiang Huo
Qun Wang
Yunlu Shi
Hangqin Liu
Jiacheng Liu
Yang Song
Xiaojian Fang
Zhongwei Lin
author_sort Yan Li
collection DOAJ
description Abstract The leaves above the ear serve as a major source of carbohydrates for grain filling in maize. However, increasing the number of leaves above the ear to strengthen the source and improve maize yield remains challenging in modern maize breeding. Here, we clone the causative gene of the quantitative trait locus (QTL) associated with the number of leaves above the ear. The causative gene is the previously reported MADS-box domain-encoding gene Tunicate1 (Tu1), which is responsible for the phenotype of pod corn or Tunicate maize. We show that Tu1 can substantially increase the leaf number above the ear while maintaining the source‒sink balance. A distal upstream 5-base pair (bp) insertion of Tu1 originating from a popcorn landrace enhances its transcription, coregulates its plastochron activators and repressors, and increases the number of leaves above the ear. Field tests demonstrate that the 5-bp insertion of Tu1 can increase grain yields by 11.4% and 9.5% under regular and dense planting conditions, respectively. The discovery of this favorable Tu1 allele from landraces suggests that landraces represent a valuable resource for high-yield breeding of maize.
format Article
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institution Kabale University
issn 2041-1723
language English
publishDate 2024-11-01
publisher Nature Portfolio
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series Nature Communications
spelling doaj-art-508ccbb582bf4e80897aec26858f47222025-02-02T12:30:59ZengNature PortfolioNature Communications2041-17232024-11-0115111510.1038/s41467-024-54148-7MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the earYan Li0Jian Wang1Shuyang Zhong2Qiang Huo3Qun Wang4Yunlu Shi5Hangqin Liu6Jiacheng Liu7Yang Song8Xiaojian Fang9Zhongwei Lin10State Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityCenter for Crop Functional Genomics and Molecular Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityState Key Laboratory of Maize Bio-Breeding; National Maize Improvement Center; Department of Crop Genetics and Breeding; China Agricultural UniversityAbstract The leaves above the ear serve as a major source of carbohydrates for grain filling in maize. However, increasing the number of leaves above the ear to strengthen the source and improve maize yield remains challenging in modern maize breeding. Here, we clone the causative gene of the quantitative trait locus (QTL) associated with the number of leaves above the ear. The causative gene is the previously reported MADS-box domain-encoding gene Tunicate1 (Tu1), which is responsible for the phenotype of pod corn or Tunicate maize. We show that Tu1 can substantially increase the leaf number above the ear while maintaining the source‒sink balance. A distal upstream 5-base pair (bp) insertion of Tu1 originating from a popcorn landrace enhances its transcription, coregulates its plastochron activators and repressors, and increases the number of leaves above the ear. Field tests demonstrate that the 5-bp insertion of Tu1 can increase grain yields by 11.4% and 9.5% under regular and dense planting conditions, respectively. The discovery of this favorable Tu1 allele from landraces suggests that landraces represent a valuable resource for high-yield breeding of maize.https://doi.org/10.1038/s41467-024-54148-7
spellingShingle Yan Li
Jian Wang
Shuyang Zhong
Qiang Huo
Qun Wang
Yunlu Shi
Hangqin Liu
Jiacheng Liu
Yang Song
Xiaojian Fang
Zhongwei Lin
MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear
Nature Communications
title MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear
title_full MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear
title_fullStr MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear
title_full_unstemmed MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear
title_short MADS-box encoding gene Tunicate1 positively controls maize yield by increasing leaf number above the ear
title_sort mads box encoding gene tunicate1 positively controls maize yield by increasing leaf number above the ear
url https://doi.org/10.1038/s41467-024-54148-7
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