Modify possibilities of the secondary structures prediction method

It was analyzed dependence of the average accuracy of secondary protein structure prediction on various GOR algorithm modifications. In essence new modification has expanded informational parameter set by taking into account secondary structure of neighboring amino acid. The accuracy of the method...

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Main Authors: Alvydas Špokas, Albertas Timinskas
Format: Article
Language:English
Published: Vilnius University Press 2003-12-01
Series:Lietuvos Matematikos Rinkinys
Online Access:https://www.journals.vu.lt/LMR/article/view/32552
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author Alvydas Špokas
Albertas Timinskas
author_facet Alvydas Špokas
Albertas Timinskas
author_sort Alvydas Špokas
collection DOAJ
description It was analyzed dependence of the average accuracy of secondary protein structure prediction on various GOR algorithm modifications. In essence new modification has expanded informational parameter set by taking into account secondary structure of neighboring amino acid. The accuracy of the method with this modification increases almost for 1 percent. This increase in accuracy is quite significant, as the amount of informational parameters increases not much.
format Article
id doaj-art-4aa580a7572e4fba86a9c3d2232de792
institution Kabale University
issn 0132-2818
2335-898X
language English
publishDate 2003-12-01
publisher Vilnius University Press
record_format Article
series Lietuvos Matematikos Rinkinys
spelling doaj-art-4aa580a7572e4fba86a9c3d2232de7922025-01-20T18:17:20ZengVilnius University PressLietuvos Matematikos Rinkinys0132-28182335-898X2003-12-0143spec.10.15388/LMR.2003.32552Modify possibilities of the secondary structures prediction methodAlvydas Špokas0Albertas Timinskas1Vilnius Gediminas Technical UniversityVilnius Gediminas Technical University It was analyzed dependence of the average accuracy of secondary protein structure prediction on various GOR algorithm modifications. In essence new modification has expanded informational parameter set by taking into account secondary structure of neighboring amino acid. The accuracy of the method with this modification increases almost for 1 percent. This increase in accuracy is quite significant, as the amount of informational parameters increases not much. https://www.journals.vu.lt/LMR/article/view/32552
spellingShingle Alvydas Špokas
Albertas Timinskas
Modify possibilities of the secondary structures prediction method
Lietuvos Matematikos Rinkinys
title Modify possibilities of the secondary structures prediction method
title_full Modify possibilities of the secondary structures prediction method
title_fullStr Modify possibilities of the secondary structures prediction method
title_full_unstemmed Modify possibilities of the secondary structures prediction method
title_short Modify possibilities of the secondary structures prediction method
title_sort modify possibilities of the secondary structures prediction method
url https://www.journals.vu.lt/LMR/article/view/32552
work_keys_str_mv AT alvydasspokas modifypossibilitiesofthesecondarystructurespredictionmethod
AT albertastiminskas modifypossibilitiesofthesecondarystructurespredictionmethod