Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis
Anaplasma marginale is the main etiologic agent of bovine anaplasmosis, and it is extensively distributed worldwide. We have previously reported the first genome sequence of a Mexican strain of A. marginale (Mex-01-001-01). In this work, we report the genomic analysis of one strain from Hidalgo (MEX...
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| Format: | Article |
| Language: | English |
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Wiley
2020-01-01
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| Series: | International Journal of Genomics |
| Online Access: | http://dx.doi.org/10.1155/2020/5902029 |
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| author | Fernando Martínez-Ocampo Rosa Estela Quiroz-Castañeda Itzel Amaro-Estrada Edgar Dantán-González Jesús Francisco Preciado de la Torre Sergio Rodríguez-Camarillo |
| author_facet | Fernando Martínez-Ocampo Rosa Estela Quiroz-Castañeda Itzel Amaro-Estrada Edgar Dantán-González Jesús Francisco Preciado de la Torre Sergio Rodríguez-Camarillo |
| author_sort | Fernando Martínez-Ocampo |
| collection | DOAJ |
| description | Anaplasma marginale is the main etiologic agent of bovine anaplasmosis, and it is extensively distributed worldwide. We have previously reported the first genome sequence of a Mexican strain of A. marginale (Mex-01-001-01). In this work, we report the genomic analysis of one strain from Hidalgo (MEX-14-010-01), one from Morelos (MEX-17-017-01), and two strains from Veracruz (MEX-30-184-02 and MEX-30-193-01). We found that the genome average size is 1.16-1.17 Mbp with a GC content close to 49.80%. The genomic comparison reveals that most of the A. marginale genomes are highly conserved and the phylogeny showed that Mexican strains cluster with Brazilian strains. The genomic information contained in the four draft genomes of A. marginale from Mexico will contribute to understanding the molecular landscape of this pathogen. |
| format | Article |
| id | doaj-art-463bf8409a584826a79b31b9ac0184a0 |
| institution | Kabale University |
| issn | 2314-436X 2314-4378 |
| language | English |
| publishDate | 2020-01-01 |
| publisher | Wiley |
| record_format | Article |
| series | International Journal of Genomics |
| spelling | doaj-art-463bf8409a584826a79b31b9ac0184a02025-02-03T01:05:08ZengWileyInternational Journal of Genomics2314-436X2314-43782020-01-01202010.1155/2020/59020295902029Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine AnaplasmosisFernando Martínez-Ocampo0Rosa Estela Quiroz-Castañeda1Itzel Amaro-Estrada2Edgar Dantán-González3Jesús Francisco Preciado de la Torre4Sergio Rodríguez-Camarillo5Laboratorio de Estudios Ecogenómicos, Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, C.P. 62209 Cuernavaca, Morelos, MexicoUnidad de Anaplasmosis, Centro Nacional de Investigación Disciplinaria en Salud Animal e Inocuidad, INIFAP, C.P. 62574 Jiutepec, Morelos, MexicoUnidad de Anaplasmosis, Centro Nacional de Investigación Disciplinaria en Salud Animal e Inocuidad, INIFAP, C.P. 62574 Jiutepec, Morelos, MexicoLaboratorio de Estudios Ecogenómicos, Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, C.P. 62209 Cuernavaca, Morelos, MexicoUnidad de Anaplasmosis, Centro Nacional de Investigación Disciplinaria en Salud Animal e Inocuidad, INIFAP, C.P. 62574 Jiutepec, Morelos, MexicoUnidad de Anaplasmosis, Centro Nacional de Investigación Disciplinaria en Salud Animal e Inocuidad, INIFAP, C.P. 62574 Jiutepec, Morelos, MexicoAnaplasma marginale is the main etiologic agent of bovine anaplasmosis, and it is extensively distributed worldwide. We have previously reported the first genome sequence of a Mexican strain of A. marginale (Mex-01-001-01). In this work, we report the genomic analysis of one strain from Hidalgo (MEX-14-010-01), one from Morelos (MEX-17-017-01), and two strains from Veracruz (MEX-30-184-02 and MEX-30-193-01). We found that the genome average size is 1.16-1.17 Mbp with a GC content close to 49.80%. The genomic comparison reveals that most of the A. marginale genomes are highly conserved and the phylogeny showed that Mexican strains cluster with Brazilian strains. The genomic information contained in the four draft genomes of A. marginale from Mexico will contribute to understanding the molecular landscape of this pathogen.http://dx.doi.org/10.1155/2020/5902029 |
| spellingShingle | Fernando Martínez-Ocampo Rosa Estela Quiroz-Castañeda Itzel Amaro-Estrada Edgar Dantán-González Jesús Francisco Preciado de la Torre Sergio Rodríguez-Camarillo Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis International Journal of Genomics |
| title | Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis |
| title_full | Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis |
| title_fullStr | Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis |
| title_full_unstemmed | Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis |
| title_short | Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis |
| title_sort | whole genome sequencing of mexican strains of anaplasma marginale an approach to the causal agent of bovine anaplasmosis |
| url | http://dx.doi.org/10.1155/2020/5902029 |
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