Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositions
Abstract Most of the species in Paris have important medicinal values in China. Polyphyllins are the key components in Paris, with varying levels and compositions among different species. This study investigated polyphyllin compositions of 206 Paris samples from 16 different producing areas. 9 Paris...
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| Format: | Article |
| Language: | English |
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Nature Portfolio
2024-11-01
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| Series: | Scientific Data |
| Online Access: | https://doi.org/10.1038/s41597-024-04066-6 |
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| author | Ping Xu Jia Chen Qi Mi Wenchun Li You Lu Wenxiu Luo Mengwen Yu Xuan Zhang Zhenhua Tu Honggao Xu Guowei Zheng |
| author_facet | Ping Xu Jia Chen Qi Mi Wenchun Li You Lu Wenxiu Luo Mengwen Yu Xuan Zhang Zhenhua Tu Honggao Xu Guowei Zheng |
| author_sort | Ping Xu |
| collection | DOAJ |
| description | Abstract Most of the species in Paris have important medicinal values in China. Polyphyllins are the key components in Paris, with varying levels and compositions among different species. This study investigated polyphyllin compositions of 206 Paris samples from 16 different producing areas. 9 Paris polyphylla var. yunnanensis, 3 Paris fargesii, and 3 Paris forrestii were selected based on polyphyllin levels and composition for metabolome and transcriptome analysis. A total of 1,243 metabolites were identified among these samples, along with 92.11 Gb of full-length transcriptome data. This study provides potential candidate genes involved in polyphyllins synthesis in Paris, aiming to facilitate the biosynthesis of different polyphyllins. |
| format | Article |
| id | doaj-art-4366c8e2ff20483da2c9adca9d5f4a9e |
| institution | DOAJ |
| issn | 2052-4463 |
| language | English |
| publishDate | 2024-11-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Scientific Data |
| spelling | doaj-art-4366c8e2ff20483da2c9adca9d5f4a9e2025-08-20T02:51:45ZengNature PortfolioScientific Data2052-44632024-11-011111710.1038/s41597-024-04066-6Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositionsPing Xu0Jia Chen1Qi Mi2Wenchun Li3You Lu4Wenxiu Luo5Mengwen Yu6Xuan Zhang7Zhenhua Tu8Honggao Xu9Guowei Zheng10College of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Ethnic Medicine, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineCollege of Chinese Material Medica, Yunnan University of Chinese MedicineAbstract Most of the species in Paris have important medicinal values in China. Polyphyllins are the key components in Paris, with varying levels and compositions among different species. This study investigated polyphyllin compositions of 206 Paris samples from 16 different producing areas. 9 Paris polyphylla var. yunnanensis, 3 Paris fargesii, and 3 Paris forrestii were selected based on polyphyllin levels and composition for metabolome and transcriptome analysis. A total of 1,243 metabolites were identified among these samples, along with 92.11 Gb of full-length transcriptome data. This study provides potential candidate genes involved in polyphyllins synthesis in Paris, aiming to facilitate the biosynthesis of different polyphyllins.https://doi.org/10.1038/s41597-024-04066-6 |
| spellingShingle | Ping Xu Jia Chen Qi Mi Wenchun Li You Lu Wenxiu Luo Mengwen Yu Xuan Zhang Zhenhua Tu Honggao Xu Guowei Zheng Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositions Scientific Data |
| title | Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositions |
| title_full | Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositions |
| title_fullStr | Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositions |
| title_full_unstemmed | Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositions |
| title_short | Metabolomics and transcriptomics profiling of three Paris species with varied polyphyllin compositions |
| title_sort | metabolomics and transcriptomics profiling of three paris species with varied polyphyllin compositions |
| url | https://doi.org/10.1038/s41597-024-04066-6 |
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