Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider

Apple scab is a disease caused by <i>Venturia inaequalis</i>; it alters the vegetative cycle of apple trees and affects the fruits in orchards or during post-harvest storage. Utilizing rotten apples in cidermaking is a promising technique to mitigate crop losses; nonetheless, uncertainti...

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Main Authors: Valeria Gualandri, Roberto Larcher, Elena Franciosi, Mauro Paolini, Tiziana Nardin, Ilaria Pertot, Raffaele Guzzon
Format: Article
Language:English
Published: MDPI AG 2025-05-01
Series:Molecules
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Online Access:https://www.mdpi.com/1420-3049/30/11/2322
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author Valeria Gualandri
Roberto Larcher
Elena Franciosi
Mauro Paolini
Tiziana Nardin
Ilaria Pertot
Raffaele Guzzon
author_facet Valeria Gualandri
Roberto Larcher
Elena Franciosi
Mauro Paolini
Tiziana Nardin
Ilaria Pertot
Raffaele Guzzon
author_sort Valeria Gualandri
collection DOAJ
description Apple scab is a disease caused by <i>Venturia inaequalis</i>; it alters the vegetative cycle of apple trees and affects the fruits in orchards or during post-harvest storage. Utilizing rotten apples in cidermaking is a promising technique to mitigate crop losses; nonetheless, uncertainties persist regarding the beneficial effects of damaged fruits. This study involves a thorough chemical analysis of cider produced from both healthy and scab-infected fruits to identify compositional changes caused by microbial proliferation and to assess their impact on cider quality. Apples infected by post-harvest apple scab, as opposed to uninfected apples, were employed in cidermaking. The peel microbiota was described by plate count, and next-generation sequencing-based metabarcoding methods were used to describe the peel microbiota, while HPLC and GC MS-MS were used to characterize the cider compositions. Apples infected with post-harvest scab host a specific fungal consortium with higher biodiversity, as evidenced by the Shannon evenness index, especially in the fungi kingdom. The presence of apple scab slows fermentation by up to 23%, lowers ethanol accumulation by up to 0.4%, and affects certain cider constituents: sugars, alcohols, amino acids, fatty acids, and esters. The statistical treatment of data relative to the chemical profile (PLS and PCA on the 31 compounds with VIP > 1) distinguishes ciders made from altered or safe fruits. Scab-infected apples can be valorized in the agri-food industry; however, microbiota alterations must not be underestimated. It is necessary to implement adequate mitigation strategies.
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spelling doaj-art-39d03e95722e4a1d8a869a1d721f18b02025-08-20T02:23:00ZengMDPI AGMolecules1420-30492025-05-013011232210.3390/molecules30112322Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of CiderValeria Gualandri0Roberto Larcher1Elena Franciosi2Mauro Paolini3Tiziana Nardin4Ilaria Pertot5Raffaele Guzzon6Centro di Trasferimento Tecnologico, Fondazione Edmund Mach, Via Mach 1, 38010 San Michele all’Adige, TN, ItalyCentro di Trasferimento Tecnologico, Fondazione Edmund Mach, Via Mach 1, 38010 San Michele all’Adige, TN, ItalyCentro di Ricerca e Innovazione, Fondazione Edmund Mach, Via Mach 1, 38010 San Michele all’Adige, TN, ItalyCentro di Trasferimento Tecnologico, Fondazione Edmund Mach, Via Mach 1, 38010 San Michele all’Adige, TN, ItalyCentro di Trasferimento Tecnologico, Fondazione Edmund Mach, Via Mach 1, 38010 San Michele all’Adige, TN, ItalyCenter Agriculture Food Environment (C3A), University of Trento, Via Mach 1, 38010 San Michele all’Adige, TN, ItalyCentro di Trasferimento Tecnologico, Fondazione Edmund Mach, Via Mach 1, 38010 San Michele all’Adige, TN, ItalyApple scab is a disease caused by <i>Venturia inaequalis</i>; it alters the vegetative cycle of apple trees and affects the fruits in orchards or during post-harvest storage. Utilizing rotten apples in cidermaking is a promising technique to mitigate crop losses; nonetheless, uncertainties persist regarding the beneficial effects of damaged fruits. This study involves a thorough chemical analysis of cider produced from both healthy and scab-infected fruits to identify compositional changes caused by microbial proliferation and to assess their impact on cider quality. Apples infected by post-harvest apple scab, as opposed to uninfected apples, were employed in cidermaking. The peel microbiota was described by plate count, and next-generation sequencing-based metabarcoding methods were used to describe the peel microbiota, while HPLC and GC MS-MS were used to characterize the cider compositions. Apples infected with post-harvest scab host a specific fungal consortium with higher biodiversity, as evidenced by the Shannon evenness index, especially in the fungi kingdom. The presence of apple scab slows fermentation by up to 23%, lowers ethanol accumulation by up to 0.4%, and affects certain cider constituents: sugars, alcohols, amino acids, fatty acids, and esters. The statistical treatment of data relative to the chemical profile (PLS and PCA on the 31 compounds with VIP > 1) distinguishes ciders made from altered or safe fruits. Scab-infected apples can be valorized in the agri-food industry; however, microbiota alterations must not be underestimated. It is necessary to implement adequate mitigation strategies.https://www.mdpi.com/1420-3049/30/11/2322apple scabpost-harvestciderapple microbiotacircular economyfood remediation
spellingShingle Valeria Gualandri
Roberto Larcher
Elena Franciosi
Mauro Paolini
Tiziana Nardin
Ilaria Pertot
Raffaele Guzzon
Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider
Molecules
apple scab
post-harvest
cider
apple microbiota
circular economy
food remediation
title Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider
title_full Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider
title_fullStr Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider
title_full_unstemmed Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider
title_short Impact of Post-Harvest Apple Scab on Peel Microbiota, Fermentation Dynamics, and the Volatile/Non-Volatile Composition of Cider
title_sort impact of post harvest apple scab on peel microbiota fermentation dynamics and the volatile non volatile composition of cider
topic apple scab
post-harvest
cider
apple microbiota
circular economy
food remediation
url https://www.mdpi.com/1420-3049/30/11/2322
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