Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variants

Abstract Background Microcephalic Osteodysplastic Primordial Dwarfism Type II (MOPD II) is an autosomal recessive rare genetic condition marked by characteristic clinical symptoms of prenatal and post-natal growth retardation, reduced height, and microcephaly caused by variations in PCNT gene locate...

Full description

Saved in:
Bibliographic Details
Main Authors: Amit Singh, Mahak Garg, Mohammed Shariq, Preeti Khetarpal, Inusha Panigrahi
Format: Article
Language:English
Published: SpringerOpen 2025-01-01
Series:Egyptian Journal of Medical Human Genetics
Subjects:
Online Access:https://doi.org/10.1186/s43042-025-00636-4
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1832594680630476800
author Amit Singh
Mahak Garg
Mohammed Shariq
Preeti Khetarpal
Inusha Panigrahi
author_facet Amit Singh
Mahak Garg
Mohammed Shariq
Preeti Khetarpal
Inusha Panigrahi
author_sort Amit Singh
collection DOAJ
description Abstract Background Microcephalic Osteodysplastic Primordial Dwarfism Type II (MOPD II) is an autosomal recessive rare genetic condition marked by characteristic clinical symptoms of prenatal and post-natal growth retardation, reduced height, and microcephaly caused by variations in PCNT gene located on chromosome 21q22. Case presentation Four patients of Indian origin with growth deficiency and additional clinical features of MOPDII were recruited from a tertiary health care center and whole exome sequencing was performed on blood samples from these patients. Data were analyzed using standard bioinformatic algorithms and possible causal variants identified. Out of 4, 2 patients were identified to have splice site variants, one had nonsense variant, and one with single nucleotide deletion leading to frameshift in PCNT. All identified variants were in homozygous state. The variant PCNT:c.3465-1G > A has previously been reported in two unrelated patients in Israeli Druze population. The c.9273 + 1G > A variant has been documented in two independent studies, one from the United states and the other from the United Kingdom. Two mutations, a nonsense c.5299C > T and a frameshift single nucleotide deletion c.4180delG are currently mentioned in few databases only. Conclusion All four patients had significant microcephaly and growth retardation and the new variants were found to be likely pathogenic by in silico analysis. Early detection of the syndrome is essential for early interventions, proper genetic counseling and prenatal diagnosis.
format Article
id doaj-art-35d9e8967de7402da71814567b0d09c2
institution Kabale University
issn 2090-2441
language English
publishDate 2025-01-01
publisher SpringerOpen
record_format Article
series Egyptian Journal of Medical Human Genetics
spelling doaj-art-35d9e8967de7402da71814567b0d09c22025-01-19T12:25:57ZengSpringerOpenEgyptian Journal of Medical Human Genetics2090-24412025-01-012611710.1186/s43042-025-00636-4Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variantsAmit Singh0Mahak Garg1Mohammed Shariq2Preeti Khetarpal3Inusha Panigrahi4Laboratory for Reproductive and Developmental Disorders, Department of Human Genetics and Molecular Medicine, Central University of PunjabGenetic Metabolic Unit, Department of Pediatrics, PGIMERGenetic Metabolic Unit, Department of Pediatrics, PGIMERLaboratory for Reproductive and Developmental Disorders, Department of Human Genetics and Molecular Medicine, Central University of PunjabGenetic Metabolic Unit, Department of Pediatrics, PGIMERAbstract Background Microcephalic Osteodysplastic Primordial Dwarfism Type II (MOPD II) is an autosomal recessive rare genetic condition marked by characteristic clinical symptoms of prenatal and post-natal growth retardation, reduced height, and microcephaly caused by variations in PCNT gene located on chromosome 21q22. Case presentation Four patients of Indian origin with growth deficiency and additional clinical features of MOPDII were recruited from a tertiary health care center and whole exome sequencing was performed on blood samples from these patients. Data were analyzed using standard bioinformatic algorithms and possible causal variants identified. Out of 4, 2 patients were identified to have splice site variants, one had nonsense variant, and one with single nucleotide deletion leading to frameshift in PCNT. All identified variants were in homozygous state. The variant PCNT:c.3465-1G > A has previously been reported in two unrelated patients in Israeli Druze population. The c.9273 + 1G > A variant has been documented in two independent studies, one from the United states and the other from the United Kingdom. Two mutations, a nonsense c.5299C > T and a frameshift single nucleotide deletion c.4180delG are currently mentioned in few databases only. Conclusion All four patients had significant microcephaly and growth retardation and the new variants were found to be likely pathogenic by in silico analysis. Early detection of the syndrome is essential for early interventions, proper genetic counseling and prenatal diagnosis.https://doi.org/10.1186/s43042-025-00636-4Autosomal recessiveFailure to thriveMicrocephalyPCNTMOPD II
spellingShingle Amit Singh
Mahak Garg
Mohammed Shariq
Preeti Khetarpal
Inusha Panigrahi
Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variants
Egyptian Journal of Medical Human Genetics
Autosomal recessive
Failure to thrive
Microcephaly
PCNT
MOPD II
title Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variants
title_full Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variants
title_fullStr Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variants
title_full_unstemmed Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variants
title_short Microcephalic osteodysplastic primordial dwarfism type II in four Indian children with PCNT variants
title_sort microcephalic osteodysplastic primordial dwarfism type ii in four indian children with pcnt variants
topic Autosomal recessive
Failure to thrive
Microcephaly
PCNT
MOPD II
url https://doi.org/10.1186/s43042-025-00636-4
work_keys_str_mv AT amitsingh microcephalicosteodysplasticprimordialdwarfismtypeiiinfourindianchildrenwithpcntvariants
AT mahakgarg microcephalicosteodysplasticprimordialdwarfismtypeiiinfourindianchildrenwithpcntvariants
AT mohammedshariq microcephalicosteodysplasticprimordialdwarfismtypeiiinfourindianchildrenwithpcntvariants
AT preetikhetarpal microcephalicosteodysplasticprimordialdwarfismtypeiiinfourindianchildrenwithpcntvariants
AT inushapanigrahi microcephalicosteodysplasticprimordialdwarfismtypeiiinfourindianchildrenwithpcntvariants